Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1701 ATGGGAACAAGAAACTTCCTCTGGAATTTTACAAAAAAGTTTGTCACATTTGGGCTCATTACTGTGACTGTATCTGATCGTTATGTAACTGTTGTACCGGTTCGAGGTGGCTCTATGTCTCCCACCTTTAATCCTAAAACCAGTTCCTCTACGGGAAATATTTCTGATGACTATGTCTTGGTCGAGAAATTTTGCCTTAACAAGTACAAGTTTTCACATGGTGACGTGGTGGTCTTCCGTTCCCCACTGAATCATAAGGAGACACACATAAAAAGAATAGTTGCGTTACCTGGTGAATGGTTTGGTAATCGTCAAAACTATGATGTGCTGAAGATTCCAGAAGGCCATTGTTGGGTTGAGGGAGACAACACAGCTTCTAGCATGGACTCAAAGTCATTTGGACCCGTTGTTTTGGGTCTGATTAGAGGAAGAGTGACCCATGTTGTGTGGCCACCTCATAGAATAGGTGCTGTGAAAAGTACCCCACCAGAAAGATTATCCTCATTATAG 510 0.4235 MGTRNFLWNFTKKFVTFGLITVTVSDRYVTVVPVRGGSMSPTFNPKTSSSTGNISDDYVLVEKFCLNKYKFSHGDVVVFRSPLNHKETHIKRIVALPGEWFGNRQNYDVLKIPEGHCWVEGDNTASSMDSKSFGPVVLGLIRGRVTHVVWPPHRIGAVKSTPPERLSSL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1701 169 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Lan11g1701 169 Gene3D Umud Fragment, subunit A 26 161 - -
Lan11g1701 169 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Lan11g1701 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan11g1701 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan11g1701 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan11g1701 169 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 165 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Lan11g1701 169 Pfam Signal peptidase, peptidase S26 106 150 IPR019533 GO:0004252|GO:0006465
Lan11g1701 169 Pfam Signal peptidase, peptidase S26 8 99 IPR019533 GO:0004252|GO:0006465
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1701 39 162 MADS-box Gene Family AT1G29960 36.923 3.33e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1701 K09648 - gmx:100527429 289.656