Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1699 ATGAGTGATTCAAATGTTGCATCAGCATTTGAGGCATTTTTGCAAGGTTGGTTGATGAGGCAAAGATGCCATCTTGATGAGCTTATCTCAGCTCAGCAAGAAATGACAGATTTTGACAGCATAAGAGGATTGATAAACAGGGTAATCTGCCACTATGGACAATACTATGAAGAGAAATCAAAGGTTGCCCAAAACAACATCCTCCTTGTTTTCTCACCACCATGGTTCAGTTCATTGGAAAGAATGTTTCTTTGGATGGCAGGTTTCAAACCTGGGATGACATTTGAGGTTGTGAACACAGCTTTGGAGGATGAGTTATCTCAAGAACAAAAGCATAGGTTGATTCAAATCCAACAAGAGACCAAGTTCAAGGAGAGGGAACTCAATGATGAGTTGGCTAAGGTTCAAGAAAGCATTGCAGCTCCGCCACTATTGGAAATGGCAAGAAGCCATGGAAGGTTGTGCTTGGAACAAATTCAGGGAGGGCCAAGTGTGGATGCTGAATCCAATATATCTGTTCCAAATACTTTGAAGGTGGCATTGGAGAATCTGGTGATAAGGGCTGATGCTTTGAGGAGAAACACAACTTTGAAAGTTGTGCAGGTACTGAGACCTACTCAGGTTGTTACCTTCTTTGTTGCTGTGGCTGAGCTTCAGCTCAGGGTGAGGGCTTGGGGTTTGGAGAAGGATGCTCAAGGTGGATGCTAA 708 0.4336 MSDSNVASAFEAFLQGWLMRQRCHLDELISAQQEMTDFDSIRGLINRVICHYGQYYEEKSKVAQNNILLVFSPPWFSSLERMFLWMAGFKPGMTFEVVNTALEDELSQEQKHRLIQIQQETKFKERELNDELAKVQESIAAPPLLEMARSHGRLCLEQIQGGPSVDAESNISVPNTLKVALENLVIRADALRRNTTLKVVQVLRPTQVVTFFVAVAELQLRVRAWGLEKDAQGGC* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1699 235 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 232 - -
Lan11g1699 235 Pfam Seed dormancy control 24 99 IPR025422 GO:0006351|GO:0043565
Lan11g1699 235 PANTHER - 5 232 - -
Lan11g1699 235 ProSiteProfiles DOG1 domain profile. 7 232 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1699 Lan-Chr11 33290946 33292743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1699 4 224 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 27.149 5.61e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1699 - - gmx:100780874 315.079