Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1697 ATGGGTAACTGTTGCAGATCCCCCGCCGCGGTGGCTCGCGAAGACGTCAAATCCACCGATCACACTAAACCATCAGCCGCCACAACTAAGAAGAAGCATACAACTCCGACCACCGTCATCACCGCCGTCCCTAGCTCCAACATCGAGGACAAGTACCTGGTGGACCGCGAGCTCGGCCGCGGCGAATTCGGCGTCACCTACCTCTGCATCGACCGCGGCACTCGCGAACTTCTCGCTTGCAAGTCAATTTCCAAGCGGAAGCTCCGGACCGCGATCGATGTGGAGGATGTACGGCGGGAGGTGGCTATTATGCGTCACCTCCCGGAGTCTCGGAGCATCGTGGCGTTCCGTGAGGCGTGTGAGGACGACAATGCGGTTCACCTGGTGATGGAGCTGTGTGAGGGTGGAGAGCTTTTTGATAGGATTGTGGCGAGGGGGCATTATACGGAGAGGGCGGCGGCTGCGGTGACGAGAACGATTGTGGAGGTTGTGCAGCTATGTCATAAGCATGGAGTGATTCATAGAGACTTGAAACCGGAGAATTTCTTGTTTGCAAATAAGAAGGAGAATTCGCCTCTTAAGGCTATTGATTTTGGACTCTCTATATTTTTCAAGCCAGGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCCGAGGTGCTTAAGCGAAACTACGGGCCAGAAATAGATATATGGAGTGCAGGAGTGATTCTCTATATCTTATTGTGTGGTGTTCCCCCATTTTGGGCTGAATCTGAACAAGGGGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAACGGGAACCGTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTAAGCAAATGTTAGAACCTGACCCTAAGCTTCGATTAACTGCCAAACAAGTGATCGAGCATCCTTGGCTCCAAAATGCTAAGAAGGCTCCCAATGTTCCTCTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAGTTTTCAATGATGAATAGATTCAAAAGAAAAGCACTCAGGGTAATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGACATCAAAGATATGTTCAAGAAGATGGATAGTGATAATGATGGTATAGTTTCCATCGAAGAACTAAAAGCTGGATTCCAAAATTTTGAATCCCAACTTGCTGAGTCTGAAGTAAAGATGCTGATAGAAGCTGTAGATGGTAATGGGAGGGGAACACTTGACTACGGAGAATTTGTGGCTGTTTTCCTTCATTTAAAAAGGATGGCTAATGATGAGCATCTTCGCAAGGCCTTCTCCTATTTTGACAAGGATGGGAATGGATATATTGAACCAGATGAGCTACAAAATGCATTGATGGAAGATGGAGCAGAGGATTGTGCAGATGTAGCAAATGATATTTTCCAAGAAGTAGATACAGACAAGGATGGACGAATCAGCTATGAGGAATTTGTGGCTATGATGAAAACTGGAACAGATTGGAGAAAAGCATCTAGACATTACTCACGAGGAAGATTCAACAGCTTAAGCTTGAAGTTGATGAAAGATGGTTCTTTAAACTTGGGAGCTGAGTAG 1581 0.4624 MGNCCRSPAAVAREDVKSTDHTKPSAATTKKKHTTPTTVITAVPSSNIEDKYLVDRELGRGEFGVTYLCIDRGTRELLACKSISKRKLRTAIDVEDVRREVAIMRHLPESRSIVAFREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVKQMLEPDPKLRLTAKQVIEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDSDNDGIVSIEELKAGFQNFESQLAESEVKMLIEAVDGNGRGTLDYGEFVAVFLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELQNALMEDGAEDCADVANDIFQEVDTDKDGRISYEEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGAE* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1697 526 MobiDBLite consensus disorder prediction 13 27 - -
Lan11g1697 526 Pfam Protein kinase domain 54 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1697 526 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Lan11g1697 526 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Lan11g1697 526 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Lan11g1697 526 MobiDBLite consensus disorder prediction 1 35 - -
Lan11g1697 526 CDD STKc_CAMK 51 309 - -
Lan11g1697 526 SMART efh_1 393 421 IPR002048 GO:0005509
Lan11g1697 526 SMART efh_1 429 457 IPR002048 GO:0005509
Lan11g1697 526 SMART efh_1 465 493 IPR002048 GO:0005509
Lan11g1697 526 SMART efh_1 357 385 IPR002048 GO:0005509
Lan11g1697 526 ProSiteProfiles EF-hand calcium-binding domain profile. 353 388 IPR002048 GO:0005509
Lan11g1697 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Lan11g1697 526 Gene3D - 319 494 - -
Lan11g1697 526 Pfam EF-hand domain pair 356 418 IPR002048 GO:0005509
Lan11g1697 526 Pfam EF-hand domain pair 428 491 IPR002048 GO:0005509
Lan11g1697 526 Coils Coil 375 395 - -
Lan11g1697 526 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Lan11g1697 526 SUPERFAMILY Protein kinase-like (PK-like) 35 335 IPR011009 -
Lan11g1697 526 SMART serkin_6 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1697 526 ProSitePatterns EF-hand calcium-binding domain. 366 378 IPR018247 -
Lan11g1697 526 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 11 507 - -
Lan11g1697 526 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
Lan11g1697 526 CDD EFh 429 491 IPR002048 GO:0005509
Lan11g1697 526 Gene3D Phosphorylase Kinase; domain 1 53 137 - -
Lan11g1697 526 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Lan11g1697 526 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 507 - -
Lan11g1697 526 ProSiteProfiles Protein kinase domain profile. 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1697 526 SUPERFAMILY EF-hand 347 504 IPR011992 -
Lan11g1697 526 Gene3D Transferase(Phosphotransferase) domain 1 138 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1697 Lan-Chr11 33266235 33271332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1697 1 523 EF-hand Containing Proteins AT1G74740 68.173 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan11g1697 Pkinase 4.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1697 K13412 - gmx:100793170 954.51