Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1694 ATGACTACCCCTTCTTCCAACTCCTCCAATGAACATGGACAGAGCACCATCACCCAAAGAAGAACACTACAATGGGGTATCATTCTTTGGGCTGAAACCTTCTCATGCTTCTCCATCCTCTTCACCCTTTGCTTCTTTGTTGCAATGACAATGATACTTGGGGTTTATGGGTCGAGGAACCATGTACTTGGACCAGAATCTTCGCTCGTGTTTCAACCCAGCCCTTTGTTTGTACAATACGTGAAGGTAGAGAACTTAGAGTCAAAGCCAGGACCTATGCTGTATGGTTCATATACATATCCACCTCCTGATATGGTCACTACTTGGGCACAAACTCTTAATGTAGCTATTCTCTCTAACTCACATAAGGAGTGGATATATTATCTAAATAAAGGGTCTGAAGTAAATATTTCATATCGCTTGAGCTCCAAGAGATCCTCCATTTTCCTTGTAATTGGAAAAGAGGTTGAAGGCCTAACTGAGTGGTTGGAGCACCCAACATATCCTAACACAACTCTGTCATGGAACGTGATCCACGGAACTGGTATTATTACGCAAGAAATATTCAAGTCGTCGAGCTATTATGTGGCATTGGGTAGTTTTAATGAGGAGGAGGCGGAGAGCACATCCAATGATGATTGGTTTGTCAAACTGTCCTATGGACCAAGATGGGTGACATATATTATTGGCATAGTTGGAGTGACTTTGCTTATGTTTTGGTGCTTCAACTTCTTGAGCAAGTTCCGATATGCCCATGAAGATAGAGGAGTTAGATATGAGGAACCAGCACCTCAGAGAGACCATTTGCTTTCAAGTTCTGGCTCATCATATGATTCAATGTCACAGGGTGATGAAGATCTTGACTTTACCATTGATGGGATGTCTTTAGGGGATGATGAAGCCAGTAATAATAGCCGTCGGCTTTGCGCAATTTGTTTTGATGCTCCAAGGGAATGCTTCTTCCTTCCATGTGGTCATTGTGTGGCTTGTTTTGCATGTGGAACTAGGATAGCAGAGGCTTCTGGCACTTGCCCTGTTTGTAGGAGGAACATGAAGAAGGTGAGGAAGATTTTTACTGCATGA 1083 0.4294 MTTPSSNSSNEHGQSTITQRRTLQWGIILWAETFSCFSILFTLCFFVAMTMILGVYGSRNHVLGPESSLVFQPSPLFVQYVKVENLESKPGPMLYGSYTYPPPDMVTTWAQTLNVAILSNSHKEWIYYLNKGSEVNISYRLSSKRSSIFLVIGKEVEGLTEWLEHPTYPNTTLSWNVIHGTGIITQEIFKSSSYYVALGSFNEEEAESTSNDDWFVKLSYGPRWVTYIIGIVGVTLLMFWCFNFLSKFRYAHEDRGVRYEEPAPQRDHLLSSSGSSYDSMSQGDEDLDFTIDGMSLGDDEASNNSRRLCAICFDAPRECFFLPCGHCVACFACGTRIAEASGTCPVCRRNMKKVRKIFTA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1694 360 Pfam Domain of unknown function (DUF4793) 207 241 IPR032010 -
Lan11g1694 360 PANTHER E3 UBIQUITIN-PROTEIN LIGASE APD1-RELATED 206 359 - -
Lan11g1694 360 PANTHER E3 UBIQUITIN-PROTEIN LIGASE APD1-RELATED 31 207 - -
Lan11g1694 360 SUPERFAMILY RING/U-box 308 354 - -
Lan11g1694 360 Pfam Zinc finger, C3HC4 type (RING finger) 306 354 - -
Lan11g1694 360 PANTHER OS05G0521000 PROTEIN 206 359 IPR044586 GO:0004842
Lan11g1694 360 PANTHER OS05G0521000 PROTEIN 31 207 IPR044586 GO:0004842
Lan11g1694 360 SMART ring_2 309 347 IPR001841 -
Lan11g1694 360 Pfam Domain of unknown function (DUF4792) 91 154 IPR032008 -
Lan11g1694 360 ProSiteProfiles Zinc finger RING-type profile. 309 348 IPR001841 -
Lan11g1694 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 295 360 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1694 290 357 C3H Transcription Factor Family AT3G06140 29.412 7.67e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1694 - - lang:109359922 742.265