Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1672 ATGGTATTGTTGAACACTGAAACTGTTCATGGATATAAGAAATCGCGCAAGAGACGCAATGGTGGAAGTGACTCAGTTGAAGACACACTTGAGAAATGGAAGAATTACAACAAGCAAAAGCAACTTGGATCTGAAGAAAATGGGGTGGAAAAAGTGATTCACAAAGTTCCTGCAAAGGGCTCTAAAAAGGGTTGCATGAGAGGTAAAGGTGGTCCTCAGAACTCAGATTGCAACTTCAGAGGTGTGAGACAAAGGATTTGGGGTAAATGGGTTGCTGAAATTCGTGAACCTATCAATGGTGGTAACAACAACCATGTTGGTAAGAAACCAACTAGGCTTTGGCTTGGTACTTTCTCTACTGCACATGATGCTGCTCTTGCTTATGATGAAGCTGCTAAGATCATGTATGGTCCTTGTGCGCGGTTGAACTTTCCCGAGTCTTCTAGTGTTGATTCGATAGCTTCTGATGGATCATCGTCATCTAGTGTATGTGATGAAAAGTCACCTAGTGGTGATTCTGCAGATACTTCGAATGGCGATGAACTTGCAAAAGCTGAAGACAAACCCAAGTTTTCTGAGGTTGGTGTCTTTGAGGAAAATGAGGAAAAACAAGTTCTTGTCCAATTTCCAACAAATGAGGAATGTAGGACAAGAATTCATCAAGGGATAGAGGGAGAATTGGAGAATGTTTCGAAAAACTATGGCATAGACGGAGAGGATAATCACATGGAGATGGAGCCTATAGATATGGATATGATCATGACAAGAGCTGATGGTAGCACTTCTGGAACTAATGAACATGGTATTATGATAAAGAGTGAAGAAACAACAGGAGAACCATGCTGCAATCCAAGACCAAGTTGTGAGCATTTTGATAGCATCACTACTGAAATCGATGCATCTACCACGAAGAAACATATGGAGGAAGTAATTTCTGAAATTCTGCAACTTTGTAGCAACAAGTGCTCAAAGATCAGTAATATTCAGCCACAAAATGAGCAATATAAATATAAACATCTTGATGAGATGAAAACTGAGCATAAGGGTTTAGATAGTATGCAGTTTGCAGACTATGAAGTTGGTAATGATTACAGTTTCTTAAGTCCCGACTATGATTTTGGCTTATTGGAAGAGAAGAAGTTACTTGATATATGCTTTTCACATGTAGGATCTTAA 1176 0.3954 MVLLNTETVHGYKKSRKRRNGGSDSVEDTLEKWKNYNKQKQLGSEENGVEKVIHKVPAKGSKKGCMRGKGGPQNSDCNFRGVRQRIWGKWVAEIREPINGGNNNHVGKKPTRLWLGTFSTAHDAALAYDEAAKIMYGPCARLNFPESSSVDSIASDGSSSSSVCDEKSPSGDSADTSNGDELAKAEDKPKFSEVGVFEENEEKQVLVQFPTNEECRTRIHQGIEGELENVSKNYGIDGEDNHMEMEPIDMDMIMTRADGSTSGTNEHGIMIKSEETTGEPCCNPRPSCEHFDSITTEIDASTTKKHMEEVISEILQLCSNKCSKISNIQPQNEQYKYKHLDEMKTEHKGLDSMQFADYEVGNDYSFLSPDYDFGLLEEKKLLDICFSHVGS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1672 391 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 12 343 - -
Lan11g1672 391 CDD AP2 77 147 IPR001471 GO:0003700|GO:0006355
Lan11g1672 391 Gene3D AP2/ERF domain 78 147 IPR036955 GO:0003700|GO:0006355
Lan11g1672 391 MobiDBLite consensus disorder prediction 147 177 - -
Lan11g1672 391 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Lan11g1672 391 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Lan11g1672 391 SUPERFAMILY DNA-binding domain 78 146 IPR016177 GO:0003677
Lan11g1672 391 Pfam AP2 domain 77 137 IPR001471 GO:0003700|GO:0006355
Lan11g1672 391 SMART rav1_2 78 151 IPR001471 GO:0003700|GO:0006355
Lan11g1672 391 ProSiteProfiles AP2/ERF domain profile. 78 145 IPR001471 GO:0003700|GO:0006355
Lan11g1672 391 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 343 - -
Lan11g1672 391 MobiDBLite consensus disorder prediction 147 194 - -
Lan11g1672 391 MobiDBLite consensus disorder prediction 1 29 - -
Lan11g1672 391 MobiDBLite consensus disorder prediction 179 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1672 Lan-Chr11 32665140 32667115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1672 8 166 AP2-EREBP Transcription Factor Family AT2G40340 50.000 4.63e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan11g1672 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1672 - - lang:109361039 767.689