Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1671 ATGGACAACATTAATTGCTATGTTAAGGATTTTTCCACATACCCTTTTCATATTTGTTCAAATTTACTTCATCAATATTGCAATGTAGTTGGAACTAGAAGGAAAAAATGCAGCTTTATTATATACTTTGCATTGTTCTTCATGTTTTTGCAAGTTCTGGCTTCTACTACTTCTGTTATAGGACACCAATTGTTTGATGGAGTGGCTGTGACAAAATCAGATTATCAAGCACTAAGGGCATTGAAGCATGATCTTATTGATTTCAAAGGGGTTCTGAAAAGCTGGAATGATAATGGTGTTGGTGCATGTTCAGGTTCATGGGTAGGTATCAAATGTGTTAATGGAGAGGTTATTGCAATTCAGCTTCCTTTTAAAGGGTTAGGTGGAAAAATCTCTGAGAAAATTGGGCAGCTTCAATCTCTTAGAAAGATTAGTCTTCATGATAATCTTCTCAATGGTCCTATTCCTTATTCTCTTGGTTTTCTTCCAAATCTTAGAGGTGTTTATCTCTTCAATAACAAGCTTTCAGGTTCTATTCCTCCTTCTATTGGTAATTGTCCAATGCTTCAATCTTTTGATATTAGTAAAAACTTGCTTAGTGGTAAAATCCCTCCTAGTTTATCAAACTCTACTAGGATATTTAGGATCAATTTGAGTTATAATTCACTTTCTGGATCCATTCCTAGTAGTCTCACTATGTCTCATTCTCTTACTATTCTTGCATTACAATACAACAACCTTTCTGGTTCTATCCCAGATTCATGGGGTGGAATTGAAAACAGAAACAAAAACAAAAGTTTTGTTTCCAAACTTCAAGTTTTGACACTTGATCATAACCTCATTTCTGGCACTATTCCTGTTTCTATAAGCAAGTTGAGTTTGGTTGAAAACATTTCTTTAAGTCATAACCAGATTATAGGGTCTATTCCAAGTGAAATAGGTGCACTTTCAAAGCTTAGATTTCTTGATTTATCAAACAATGCTATAAATGGTACCATTCCTAAAACCTTTTCCAATCTCACTTCTCTTGTTTCATTGAACTTAGAAGGAAACAAACTTGAAAATCATGTACCAGATAGTTTGAACAGATTGCAAAACCTTTCTGTGCTTAACTTGAAGAACAATAAGCTTAATGGCCAAATACCTTCAACAATAGGGAACATCACAGCCATTACGACAATTGATCTCTCCAAAAACAAACTTGTAGGAGAAATTCCTGATTCTTTTGCTAAACTTGGAAATCTGAGTTTTTTCAATGTCTCTTATAACAATCTTTCTGGTCATGTTCCTTCTCTCCTTTCCAAGAGATTCAACTCAACTTCCTTTACAGGGAATCTTCAACTTTGTGGATACATTGCCTCAAAACCATGTTCTTCACCCTCACCTCAGATTCTTCCATCTCCATCACCAAAACCTTCTTCAAAACCACATCATCATAAATTAAGCACCAAGAGCATACTCCTCATTGTAGCAGGTGTTATCCTCATAATTCTTTTATTACTATGCTGCTTTTTGTTGTGTTGTTTGGTTAAGAAAAGGGGTGCTTCAAAAGAAAAGAATGGTAAGGCAAAATCAGCATCTGCAAGAAATGTTGAAAAAGGCGGCGGCGGCGGAATTGAATCATCATCAGGAGGTGAAGCTGGTGGGAAGCTAGTTCACTTTGATGGACCATTTGTGTTTACAGCTGATGATCTTCTATGTGCAACTGCTGAGATAATGGGAAAGAGTCCATATGGAACAGCATATAAAGCAACATTGGATGATGGGAACCAAGTTGTTGTGAAGAGGTTGAGGGAGAAGACTACTAAAGGACAGAAAGAGTTTGAAACTGAGGCTGCTTCACTTGGCAAAATCAGACACCAAAATCTATTGGCTCTAAGATCATACTATTTAGGACCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCCAAAGGAAGCTTAGCATCATTCCTTCATGCTAGGGGACCTGAAACAGTGATTGAGTGGCCAACAAGGTTGAAAATAGCCATTGGAGTTACACAGGGTTTGTGCCATCTACATAAGGAAGAGAACATAGTACATGGAAATCTTACCTCTAGCAATATACTATTAGATGAGCAAACAAATGCTCATATTACAGATTTTGGTCTTTCAAGGCTAATGACTACTTCAGCCAGCACCAACATCATTGCCACTGCAGGGAATGTTGGTTATAATCCACCTGAGCTTTCAAAGACTAAGAAGCCTAATCAAAACACTGATGTTTATAGCCTTGGTGTTATCATTTTGGAGCTCCTAACTGGTAAACCACCAGGTGAACCAACCAATGGTATGGAATTGCCACAATGGGTGGCATCAATAGTAAAGGAAGAGTGGACAAATGAAGTATTTGATTTGGAGCTTATGAGGGATGCACCAGCTATAACTGATGAACTTCTTAATACATTGAAATTAGCTCTTCATTGTGTTGATCCTTCTCCATCAGCAAGGCCAGATGTTCACCAAGTTCTTCACCAATTGGAGATGATCAACCCTGATTTGGTTGCACCTGATGATAAAAAAGGCAGTCTAATGCACGAGCCATTCGATACATCCGATAGAGTTTAA 2592 0.3735 MDNINCYVKDFSTYPFHICSNLLHQYCNVVGTRRKKCSFIIYFALFFMFLQVLASTTSVIGHQLFDGVAVTKSDYQALRALKHDLIDFKGVLKSWNDNGVGACSGSWVGIKCVNGEVIAIQLPFKGLGGKISEKIGQLQSLRKISLHDNLLNGPIPYSLGFLPNLRGVYLFNNKLSGSIPPSIGNCPMLQSFDISKNLLSGKIPPSLSNSTRIFRINLSYNSLSGSIPSSLTMSHSLTILALQYNNLSGSIPDSWGGIENRNKNKSFVSKLQVLTLDHNLISGTIPVSISKLSLVENISLSHNQIIGSIPSEIGALSKLRFLDLSNNAINGTIPKTFSNLTSLVSLNLEGNKLENHVPDSLNRLQNLSVLNLKNNKLNGQIPSTIGNITAITTIDLSKNKLVGEIPDSFAKLGNLSFFNVSYNNLSGHVPSLLSKRFNSTSFTGNLQLCGYIASKPCSSPSPQILPSPSPKPSSKPHHHKLSTKSILLIVAGVILIILLLLCCFLLCCLVKKRGASKEKNGKAKSASARNVEKGGGGGIESSSGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSPYGTAYKATLDDGNQVVVKRLREKTTKGQKEFETEAASLGKIRHQNLLALRSYYLGPKGEKLLVFDYMPKGSLASFLHARGPETVIEWPTRLKIAIGVTQGLCHLHKEENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSASTNIIATAGNVGYNPPELSKTKKPNQNTDVYSLGVIILELLTGKPPGEPTNGMELPQWVASIVKEEWTNEVFDLELMRDAPAITDELLNTLKLALHCVDPSPSARPDVHQVLHQLEMINPDLVAPDDKKGSLMHEPFDTSDRV* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1671 863 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 31 842 - -
Lan11g1671 863 Pfam Leucine rich repeat N-terminal domain 72 112 IPR013210 -
Lan11g1671 863 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 31 842 - -
Lan11g1671 863 Gene3D Phosphorylase Kinase; domain 1 573 644 - -
Lan11g1671 863 MobiDBLite consensus disorder prediction 519 544 - -
Lan11g1671 863 Pfam Leucine rich repeat 315 353 IPR001611 GO:0005515
Lan11g1671 863 Pfam Leucine rich repeat 366 425 IPR001611 GO:0005515
Lan11g1671 863 ProSiteProfiles Protein kinase domain profile. 567 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1671 863 SUPERFAMILY Protein kinase-like (PK-like) 571 843 IPR011009 -
Lan11g1671 863 SUPERFAMILY L domain-like 103 449 - -
Lan11g1671 863 CDD STKc_IRAK 573 836 - -
Lan11g1671 863 SMART LRR_typ_2 340 363 IPR003591 -
Lan11g1671 863 SMART LRR_typ_2 268 292 IPR003591 -
Lan11g1671 863 SMART LRR_typ_2 364 388 IPR003591 -
Lan11g1671 863 SMART LRR_typ_2 316 339 IPR003591 -
Lan11g1671 863 SMART LRR_typ_2 162 186 IPR003591 -
Lan11g1671 863 SMART LRR_typ_2 412 435 IPR003591 -
Lan11g1671 863 PRINTS Leucine-rich repeat signature 319 332 - -
Lan11g1671 863 PRINTS Leucine-rich repeat signature 364 377 - -
Lan11g1671 863 Pfam Protein tyrosine and serine/threonine kinase 571 835 IPR001245 GO:0004672|GO:0006468
Lan11g1671 863 Gene3D Transferase(Phosphotransferase) domain 1 645 849 - -
Lan11g1671 863 Gene3D Ribonuclease Inhibitor 73 187 IPR032675 -
Lan11g1671 863 Gene3D Ribonuclease Inhibitor 188 262 IPR032675 -
Lan11g1671 863 Gene3D Ribonuclease Inhibitor 263 463 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1671 Lan-Chr11 32657926 32661720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1671 65 840 Receptor kinase-like Gene Family AT3G51740 65.854 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan11g1671 PK_Tyr_Ser-Thr 3.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1671 - - gmx:100799290 1196.42