Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1664 ATGAATTCTTCTTTCACTCACCTTAACAACACCAACAACAATAGCAACAATAGTAGTAGTAACATGAGTACTTTGCATGATGATTATACTGCACTTAATGTTCCTAAGTTCAAGTCTTTTTCACCTCCTTCATTACCCTTTACTCCATCACCAATTTCACCTTCTTCTTTCTTAGCTTTTTCATCAGGTTTCAGCCCAACTCATGAGTTCCTCAACTCACCTAACTTGTTCCTTAATTCTCCAAATATTTTTGCATCTCCTACTAGTGATGCCTTTTCTGACCAAAGCTTCAACTGGAGGAACAGTTATGGAGAGGATCAACAACAACAACAACATAACAAGGAAGAAGATAAAAGTTACCCTGACTTCTCTTTCCAGACCCAAACAAATCCTGCACCTCCCTCTCAATTTTCCTCAACCATGTTTCAAGTGGAACAACAAAATAAACAAGACATATGGAAATTCAGTGAACCTAAAAAGCAAACTGATTTTACATCTGAGAGGGCACCAACAAAATCTGAATATACCTCAACTCAGAACTTTTCCTCAGAAATGCAAAGTAATCTTAACTGCACCAATGCATTTCAATATGCTAGAAAACAAAGGAAATCAGAAGATGGATATAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGCGAAAATCCGAGAAGTTATTACAAATGTACTCATCCAAATTGTTCCATGAGGAAGAAAGTTGAGAGGTGTTTGGATGGACAAATCACTGAAATAGTATATAAGGGAAGTCATAATCATCCAAAGCCTCAGTCTAATAGAAGAACAAGTTCTCAAAAAATGTATCAGCCTTCATCATCGTGCACTAACTCCGGTATTTCTGATCAATCAGTTGTGACACTACTAGGGAATAATCCACAAATTGAGACTGTTTCTTTACAAGAAGATTCTTCTGCTTCTGTGGAAGAGGAAGAGTTTGAGCAAACATCACAAACTAGTTATTATGAGGGAAATGAAGTTGAACTTGGTCCAGATGCTAAACGATTGAAGGAAGAGAATGGAAATGAGGGATATTATGCCTCAGGGAATAGAACTGTTAGGGAGCCTAGAGTTGTTGTTCAAACTACAAGTGAAATTGATATACTTGATGATGGTTATAGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGCTATTACAAATGCACAGCCCCTGGTTGTGCAGTGAGAAAACACGTTGAGCGAGCCGTGCACGATGTGAAAGCAGTGATCACAACATACGAAGGGAAGCACAACCATGATGTACCCGCAGCACGCGGAAGCACAGGTTACAGAAATCCTATGAACAGCAATGTGCTGGCGGCGCCTGCGCCTATAAGGCCATTGGCTGTGACTGGTTATTCAAACTCATCAAGTTTCACAAACTCACTTTACAAACCTACAAGTGGAAGTCAAGAATCATTTGCATTGGACATGCAGCAAAGCTCTAAGGCCAAGGATGACTCATTCCTTCAGTCATTTATGTCAAACAATTGA 1533 0.3901 MNSSFTHLNNTNNNSNNSSSNMSTLHDDYTALNVPKFKSFSPPSLPFTPSPISPSSFLAFSSGFSPTHEFLNSPNLFLNSPNIFASPTSDAFSDQSFNWRNSYGEDQQQQQHNKEEDKSYPDFSFQTQTNPAPPSQFSSTMFQVEQQNKQDIWKFSEPKKQTDFTSERAPTKSEYTSTQNFSSEMQSNLNCTNAFQYARKQRKSEDGYNWRKYGQKQVKGSENPRSYYKCTHPNCSMRKKVERCLDGQITEIVYKGSHNHPKPQSNRRTSSQKMYQPSSSCTNSGISDQSVVTLLGNNPQIETVSLQEDSSASVEEEEFEQTSQTSYYEGNEVELGPDAKRLKEENGNEGYYASGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTAPGCAVRKHVERAVHDVKAVITTYEGKHNHDVPAARGSTGYRNPMNSNVLAAPAPIRPLAVTGYSNSSSFTNSLYKPTSGSQESFALDMQQSSKAKDDSFLQSFMSNN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1664 510 ProSiteProfiles WRKY domain profile. 205 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 MobiDBLite consensus disorder prediction 491 510 - -
Lan11g1664 510 Gene3D WRKY domain 189 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 508 IPR044810 GO:0003700
Lan11g1664 510 MobiDBLite consensus disorder prediction 255 284 - -
Lan11g1664 510 SMART WRKY_cls 204 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 SMART WRKY_cls 375 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 SUPERFAMILY WRKY DNA-binding domain 200 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 MobiDBLite consensus disorder prediction 1 24 - -
Lan11g1664 510 ProSiteProfiles WRKY domain profile. 370 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 MobiDBLite consensus disorder prediction 104 136 - -
Lan11g1664 510 Pfam WRKY DNA -binding domain 376 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 Pfam WRKY DNA -binding domain 205 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 Gene3D WRKY domain 362 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 MobiDBLite consensus disorder prediction 122 136 - -
Lan11g1664 510 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 23 508 - -
Lan11g1664 510 SUPERFAMILY WRKY DNA-binding domain 367 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1664 510 MobiDBLite consensus disorder prediction 259 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1664 Lan-Chr11 32502633 32505611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1664 1 477 WRKY Transcription Factor Family AT2G38470 45.759 7.47e-108 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan11g1664 WRKY 3.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1664 K13424 - gmx:100792833 596.275