Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan11g1660 | ATGGCTTCTAAGCTGAACAAAGCCTCAATTATTGTGGACGCCTCCAAGTACATAGAGGAGTTGAAACAAAAAGTGGAGGGACTGAACTCTGAGCTTGGAGACACTGAATCATCATCCTCTCAAAATGATGAACTACCTATGGTGACTGTAGAAACCCTAGAAAGGGGTTTCCTTATTAATGTGTTTTCAGAAAAGAATTGCCCTGGAATGCTGGTTTCAATACTCGAAGCCTTTGAAGAACTAGGCCTTGATGTGCTTGATGCTAGGGTTTCCTGTGAAGACACTTTCCAGCTAGAAGCTGTTGGAGGAGAAAGCCAAAAGAATGATAGCATTGACGCACAAATGGTGAAGCAAGCCGTGTTGAGAGCAATCAAGAACATGGACTAA | 387 | 0.4289 | MASKLNKASIIVDASKYIEELKQKVEGLNSELGDTESSSSQNDELPMVTVETLERGFLINVFSEKNCPGMLVSILEAFEELGLDVLDARVSCEDTFQLEAVGGESQKNDSIDAQMVKQAVLRAIKNMD* | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan11g1660 | 128 | CDD | ACT_UUR-ACR-like | 68 | 124 | - | - | |
| Lan11g1660 | 128 | ProSiteProfiles | ACT domain profile. | 59 | 128 | IPR002912 | - | |
| Lan11g1660 | 128 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 3 | 128 | - | - | |
| Lan11g1660 | 128 | Coils | Coil | 11 | 38 | - | - | |
| Lan11g1660 | 128 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 3 | 128 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan11g1660 | Lan-Chr11 | 32362442 | 32365034 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan11g1660 | 3 | 122 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT5G10570 | 28.148 | 2.78e-07 | 46.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan11g1660 | - | - | gmx:100499821 | 209.534 |