Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1657 ATGTGGAAATTGTTCCCACAAATGGAACAGAAAGTACGTGTGCTTATGCAACGATACGAGCTAGGGAGATTGTTAGGCCAGGGAACCTTTGCGAAGGTCTACCATGCTAGGAACCTTCTAACTGGCATGAATGTGGCCATCAAGGTAGTTGACAAAGAAAAGATTTTGAAAGTTGGGATGATTGATCAGATCAAGCGCGAAATTTCGGTGATGAGGCTAGTTAAACATCCAAATGTGGTTGAGCTTTTTGAGGTAATGGCAAGTAAAACCAAAATTTACATTGTCATGGAGTATGCAAAAGGCGGCGAGCTTTTCAACAAAGTAGTGAAAGGAAAGTTAAAGGAAGATGCTGCTAGAAAATACTTCCAGCAACTGATTAGCGCAGTCGATTACTGCCACAGCAGAGGTGCATATCACCGAGATTTAAAGCCGGAGAATCTACTGTTGGATGAAAATGATAATTTGAAGGTTTCAGATTTTGGTTTCAGTGTACTTGCTGAATCAAAATGCGAAGATGGGTTACTCTACACTACATGTGGTACTCCTTCATATGTTGCTCCCGAAGTGATAAAAAGAAGGGGTTATGATGGAACCAAAGCTGACATATGGTCATGTGGTGTAATCCTTTATGTTCTATTGGCTGGTTATCTTCCATTCCGTGATGCAAATCTGATGCAGATGTACAAGAAGATTGGTAAAGGGGAATTCAAGTTTCCTAGATGGTTTGCACCGGATGTTCGCCGGCTGTTGTCAAAAATCTTGGATCCTAACCCAAAGACCAGGATATCAATGGTGAAAGTCATGGAAAATTCATGGTTTAAACGGGGGTTAGTGAAAGAGAAACCAGTTATAACCAATATGGAAACGAAACAAATATCTCCTCTTGATGCTGCTGATGGAGTATTTGAAGTATGCGAGAATGGTGATCCTATTGCAGACTCAAAGCAAGAACAAACAAAGCCTTGTAAATTGAATGCTTTTGATATCATATCTTTCTCAACTGGTTTCGATTTGTCTGGTTTATTCGATGATGATGTTCATAAGAAAGAGGTGCGGTTTACATCGAACAAGCCTGCATCGATTATTATCTCAAAGTTGGAGGAGATGTGTAATCAACTTCGGTTGAAAATAAAGAAGAAAGAAGGAGGTCTGTTCAAGTTGGAAGGTTCCAATGAAGGGAGGAAAGGTGCTTTGGGTATTGATGCTGAGATTTTCGAGATTACACCACAATTCCATCTGGTGGAGTTTAAAAAGTGCCATGGTGACACAATGGAGTACCAGAAGCTTTTGAAAGAGGACATTAGACCAGCACTTAACGACATTGTTTGGACTTGGCAAAGAGAACAACAACAACCTCAGCAACTCCAACATGAAGGTGAAGTGCAAGAAGAACAGATAGAGGCTATATCATCACAGCAAATTTCATAG 1428 0.4041 MWKLFPQMEQKVRVLMQRYELGRLLGQGTFAKVYHARNLLTGMNVAIKVVDKEKILKVGMIDQIKREISVMRLVKHPNVVELFEVMASKTKIYIVMEYAKGGELFNKVVKGKLKEDAARKYFQQLISAVDYCHSRGAYHRDLKPENLLLDENDNLKVSDFGFSVLAESKCEDGLLYTTCGTPSYVAPEVIKRRGYDGTKADIWSCGVILYVLLAGYLPFRDANLMQMYKKIGKGEFKFPRWFAPDVRRLLSKILDPNPKTRISMVKVMENSWFKRGLVKEKPVITNMETKQISPLDAADGVFEVCENGDPIADSKQEQTKPCKLNAFDIISFSTGFDLSGLFDDDVHKKEVRFTSNKPASIIISKLEEMCNQLRLKIKKKEGGLFKLEGSNEGRKGALGIDAEIFEITPQFHLVEFKKCHGDTMEYQKLLKEDIRPALNDIVWTWQREQQQPQQLQHEGEVQEEQIEAISSQQIS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1657 475 PANTHER - 9 457 - -
Lan11g1657 475 CDD STKc_SnRK3 18 272 - -
Lan11g1657 475 Pfam NAF domain 321 379 IPR004041 GO:0007165
Lan11g1657 475 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1657 475 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1657 475 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 9 457 - -
Lan11g1657 475 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Lan11g1657 475 MobiDBLite consensus disorder prediction 454 475 - -
Lan11g1657 475 Gene3D Kinase associated domain 1, KA1 323 444 - -
Lan11g1657 475 SUPERFAMILY Protein kinase-like (PK-like) 15 274 IPR011009 -
Lan11g1657 475 Coils Coil 363 383 - -
Lan11g1657 475 Gene3D Transferase(Phosphotransferase) domain 1 9 322 - -
Lan11g1657 475 CDD CIPK_C 325 439 - -
Lan11g1657 475 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1657 475 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1657 Lan-Chr11 32276970 32280996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1657 8 451 CBL-interacting serine-threonine protein kinases AT5G58380 63.956 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan11g1657 Pkinase 1.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1657 K07198 - gmx:100803787 708.753