Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1652 ATGCACCTACATGTGGCTATATACAAAACTCATCTTCATCGCCATGTTCTTAACATGGCAGCATCTTACAAGTACAACAACACTCAAGATTCATTGGTGAGCAACGAATCCAACTTTGATACCAACATGGTTATCATATTAGCAGCACTACTAAGCGCGTTGATTTGCGCACTCTTGCTGAACTCTATAGTGCGTTGTGTCATGCGTTGCAGCAGAAGTTTCTACAACAACGAAACATCGGAACAAACAGCGGTGAGGCTGGCCGCAACGGGGCTTAAGAAGCATGACTTGATGAAGATTCCGGTGGCGGTGTACGGCTCCGGTGAGAATATTCCGGTGACAGAATGTCCTATTTGTCTCGGAGAGTTTGAGAATGGGGACAAGGTTCGCATGTTGCCTAAGTGTAATCATGGATTTCATATAACGTGCATAGACATGTGGTTGGTGACACATTCTTCGTGCCCAAATTGTCGCCATTCGTTGTTGCTAGAGAAATCATCAACCAAGGTTTCTTGTTTGAGGTCTAATGATGTTGATGGGAATAATGATAATAATAATAATGGAGGAAGGGTCGCCAGAGATAGGTTGTGGGAAAATCGTTCCCACCAGGAAGAGAACTTGGTGGTGATCGTGGAGTAA 639 0.4429 MHLHVAIYKTHLHRHVLNMAASYKYNNTQDSLVSNESNFDTNMVIILAALLSALICALLLNSIVRCVMRCSRSFYNNETSEQTAVRLAATGLKKHDLMKIPVAVYGSGENIPVTECPICLGEFENGDKVRMLPKCNHGFHITCIDMWLVTHSSCPNCRHSLLLEKSSTKVSCLRSNDVDGNNDNNNNGGRVARDRLWENRSHQEENLVVIVE* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1652 212 MobiDBLite consensus disorder prediction 175 189 - -
Lan11g1652 212 Pfam Ring finger domain 115 158 IPR001841 -
Lan11g1652 212 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 15 172 - -
Lan11g1652 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 167 IPR013083 -
Lan11g1652 212 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Lan11g1652 212 PANTHER RING-H2 FINGER PROTEIN ATL74 15 172 - -
Lan11g1652 212 MobiDBLite consensus disorder prediction 175 196 - -
Lan11g1652 212 SUPERFAMILY RING/U-box 115 165 - -
Lan11g1652 212 SMART ring_2 116 157 IPR001841 -
Lan11g1652 212 CDD RING-H2_PA-TM-RING 115 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1652 Lan-Chr11 32153565 32154801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1652 35 178 C3H Transcription Factor Family AT3G10910 57.237 1.28e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1652 K19040 - lang:109359296 402.519