Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1650 ATGAGCTCCAATTCCTCGACAGACATATACATACTGTTAGAGTTATATACAACAACCAAGTATCATATAAGAATGGGGTGTTTCACTGTACTTAAGAGCAAGAAGAAAAAGTCTGATCAAACCACGTATGTAAAACGCTTTAGCCATAATGACAATGTACCAACGGTGCTGCCTGAACCTCAAACTCATACTCGCTCACTCCAATCTGCACCTTCTAGTTTTAGGACCAGAGTGAAACCAATTCAACCTGTTAATAAAGTCAATAACAATAGAGCACGAGCATTATCTGCTCCATCGACTCTTGATGCAGCAGAACAAGATGCACTGGCCTCAGTTGAGTATGAAGAACAAGAAGAGTCAAAACAACGAACTGGATCAATGAAGGAGCGGCGTTCGTCTAGTCCACAACCTTTGCCCCTCCCTTCACCTCAGGGCAGTGTGGCTTTAAAGGCTATGGGCAGCTTTAAGTCTGTGATAGTTAGTGGTCCTCTATCTGCTTCTGGACCTTTGCCGCTTCCACCTACTGGTTCACTTCGGAACTTTCAGTATGATGAAATTGCTTCTGCTTGCCTTAATTTCTCTTCAGATCGATGCATGTCAGAGTGTCTTTCTTCCACCATATATAAAGCTTCCTTTGGTGATGAAGTTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACACGTCTTCACCCATCAACTCAGGGGTTGAAGGAATTTATGAACGAGGTTTACACCCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGGTTTCATGCACGTGATGGTTCAGAGCAGAGAATGTTGGTGTATGAAAGGCTATACCATGGAAGCTTGGACCGGTTGTTGTATGGGAGATCTGATGGCCCATCGATTGATTGGAATACAAGAATGAAAATTGCTACGTGTGCTGCACAAGGTCTTACTTTTTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTTTCAACAGCCAACATACAAATTGACAAAGATTTTAGTGCAAAGCTTTCAGGATATGGTTGCGTTGGGCATATTCCCGAGGAAGAGATTTCAAGCAGTTCTTCGGCTGTTGGAAACCTGTCAATGGAGACTCTGGAAAAAAGAATGCTTACTCCAAAGAGCAATGTATGGAGTTTCGGAATTTTTCTTCTGGAGCTACTTACTGGAAGAAAGAATCTGGACAGCCGTCACCCCAAGGAAGAGAGAAACTTAGTGAAGTGGAGCCGGCCTTTCCTAGCTGATGATTATCGGTTGTCTTTGATAATGGACCCCCAACTTAAAGGTCGCTTTCCGTCTAAAGCGGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCGTCGGAAAGGCCTACCATGAGAACTGTTGTTAAGCATCTCAAGATGATCCAAGATGTTAAGTATTCATGCCGGTTCCCGTTGCAGGAGCCAGCAGCAATCTCTGGAAAACATATGTCAAGATCACCAAGTCTTAATGGTGTCATCTGCCCTGCACCTAGGTTGAGTTTCTCACCGTCGCCGCCATCCATAGCATTAGTTTCGGTTTCACCTCCAAGATGGTCAGGAGTGCCTATAGTTCTTCCTCCAAGAGCTTGTTTGGAGGAACTTGATAGGCAAGAAAGTAGAAAGTCATCATCTTCAGCCCCAAGGAGGGCTAGTGTTGAAGGATTTTGA 1698 0.4382 MSSNSSTDIYILLELYTTTKYHIRMGCFTVLKSKKKKSDQTTYVKRFSHNDNVPTVLPEPQTHTRSLQSAPSSFRTRVKPIQPVNKVNNNRARALSAPSTLDAAEQDALASVEYEEQEESKQRTGSMKERRSSSPQPLPLPSPQGSVALKAMGSFKSVIVSGPLSASGPLPLPPTGSLRNFQYDEIASACLNFSSDRCMSECLSSTIYKASFGDEVSSSKKFEATVTRLHPSTQGLKEFMNEVYTLASLQHPNLCKLLGFHARDGSEQRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIATCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKRMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVKHLKMIQDVKYSCRFPLQEPAAISGKHMSRSPSLNGVICPAPRLSFSPSPPSIALVSVSPPRWSGVPIVLPPRACLEELDRQESRKSSSSAPRRASVEGF* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1650 565 PANTHER OS01G0822200 PROTEIN 68 564 - -
Lan11g1650 565 MobiDBLite consensus disorder prediction 50 146 - -
Lan11g1650 565 ProSiteProfiles Protein kinase domain profile. 193 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1650 565 MobiDBLite consensus disorder prediction 544 565 - -
Lan11g1650 565 Gene3D Phosphorylase Kinase; domain 1 174 274 - -
Lan11g1650 565 MobiDBLite consensus disorder prediction 114 128 - -
Lan11g1650 565 Pfam Protein tyrosine and serine/threonine kinase 207 468 IPR001245 GO:0004672|GO:0006468
Lan11g1650 565 SUPERFAMILY Protein kinase-like (PK-like) 171 479 IPR011009 -
Lan11g1650 565 PANTHER OS01G0588500 PROTEIN-RELATED 68 564 - -
Lan11g1650 565 Gene3D Transferase(Phosphotransferase) domain 1 276 480 - -
Lan11g1650 565 MobiDBLite consensus disorder prediction 50 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1650 Lan-Chr11 32130113 32134039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1650 165 474 Receptor kinase-like Gene Family AT4G02010 37.460 1.64e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lan11g1650 PK_Tyr_Ser-Thr 7.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1650 - - gmx:100808712 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1421 7 19702440 19706458 Lan11g1650 11 32130113 32134039 LSH
Lan11g1650 11 32130113 32134039 Lan13g1198 13 17604508 17608446 LSH
Lan11g1650 11 32130113 32134039 Lan12g0177 12 2566117 2569155 PCT
Lan12g0177 12 2566117 2569155 Lan11g1650 11 32130113 32134039 PCT