Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1629 ATGTCCATATTTCTCTCTCTCTCTATGCAGGATACAATGTTGGTGCCTCCATGGCTTGAACCACTTCTAAACACATCCTTTTTCAATATCTGTCGGATTCATAAAGATGCTGCAAGAAGTGAATGTAACATGTTTTGTCTTGACTGCAATTGTGATGCTTTTTGCTTTTATTGTTGTTCTTCAAGACACAAAGATCATCAAGTCATTCAGATAAGAAGATCTTCATATCATGATGTAGTGAGGGTAGCTGAAATTCAGAAAGTGTTGAACATAAGTGGAGTGCAAACATATGTGATAAACAGTGCTAGAGTACTGTTTCTGAATGAGAGGCCTCAACCAAAATCTGGGAAAGGAGTAGTTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTAGGTTCTGTTCTTTGGGTTGTAAGCTTGTAAGAATAAAGAGAAATGGGGATGCAAGCTTTGCTTTGGATGATAGGAATGAGACAATGCCAATGGAGGGGGCATCAAGAGAGCAAGAAGAGAAATTGCGTGAAGGCTCACAACAAGACATGTATTCGGACACGCATCTTCCACCTCCTTCAAATGCAAGGAGAAGAAAAGGAATTCCTCATAGGGCTCCTTTTGGCTCCTAA 633 0.4028 MSIFLSLSMQDTMLVPPWLEPLLNTSFFNICRIHKDAARSECNMFCLDCNCDAFCFYCCSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLNISGVQTYVINSARVLFLNERPQPKSGKGVVHICEICGRSLLDPFRFCSLGCKLVRIKRNGDASFALDDRNETMPMEGASREQEEKLREGSQQDMYSDTHLPPPSNARRRKGIPHRAPFGS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1629 210 Pfam PLATZ transcription factor 72 143 IPR006734 -
Lan11g1629 210 MobiDBLite consensus disorder prediction 163 182 - -
Lan11g1629 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 209 - -
Lan11g1629 210 MobiDBLite consensus disorder prediction 157 210 - -
Lan11g1629 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1629 Lan-Chr11 31481748 31483817 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan11g1629 PLATZ 6.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1629 - - gmx:100809455 358.221