Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1607 ATGTTGGGAGATATGAACAAAAAGTCAATGGCATTTGTTGCTAAAACCATTTCAACAAAGTTACATGTTCCTCTTCTTCAATATCGTTTCCTCTGTTCTAATTCTTCTCCTCCTTCCACCAATAAGCTCTTTGTTGGAGGGTTGTCATGGTCAGTGGATGAGAAATCTCTCGTAGATGCTTTCTCTTCATTTGGAGACGTCACTGAAGTGAGAATAGTATATGATAAAGACAGTGGTAGGTCCAGAGGCTTTGGATTTGTCATCTTTTCAAATGAAGATAATGCCAAATGTGCAAAGGATGCAATGGATGGAAAGGCTCTGTTAGGCAGGCCATTGAGGATAAATTTTGCTCTCGAGAAGGCTCGTGGCTCGCCCGTTGTAGTTCCCCGACTTTCAGATATTGGACATTTAAAAAGGCACTAA 423 0.409 MLGDMNKKSMAFVAKTISTKLHVPLLQYRFLCSNSSPPSTNKLFVGGLSWSVDEKSLVDAFSSFGDVTEVRIVYDKDSGRSRGFGFVIFSNEDNAKCAKDAMDGKALLGRPLRINFALEKARGSPVVVPRLSDIGHLKRH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1607 140 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 113 IPR000504 GO:0003723
Lan11g1607 140 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL 5 138 - -
Lan11g1607 140 SMART rrm1_1 42 115 IPR000504 GO:0003723
Lan11g1607 140 Gene3D - 28 124 IPR012677 -
Lan11g1607 140 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Lan11g1607 140 SUPERFAMILY RNA-binding domain, RBD 23 124 IPR035979 GO:0003676
Lan11g1607 140 PANTHER TRANSFORMER-2-RELATED 5 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1607 Lan-Chr11 30929132 30931162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1607 29 134 Eukaryotic Initiation Factors Gene Family AT1G22760 30.088 1.81e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1607 - - lang:109361234 281.567