Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1605 ATGGATTTTGGTCAAGGTTATATATCGAAAGAGCATCGCGAGCTTCATCAATCTGCAACAGAAAGTGCAGATCCATCATCTGTTTCTCCATTGCAAATTTCTCTTAAGTCACCAAGATCCCTTAAATCTCCAAGGTCTCCTAAGTCTCCAAGGTCCCCAAAGGTGCAAGGCAAGGGAAGCAATCTAAGTCCTAGGCATTGTAAGCAATCACATTCTCAAATCGATGGACGTCCGAAGAAAGGTGGTTCTGGTGGGAAAGGTACTTGGGGTGGATTGCTTGAAACAGATGACCTGAACTCTCTTGACCCCAATGATCCAAACTATGACAGCACTGAGGATTATGACAACTTAAATGAAAAGAAAAAGAACACAGATCTGGATGATTACAAGAAAAAAGCTACAATAATAGTGGAAGAGTACTTTACCACTGATGATGTTGTTGCAACAATAAATGAAATTAGAGAACTCGGAAAACCGCTGTATGGATACTATTTTGTCAAGAAGCTTGTCTCTATCTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTATACTGTTATCTGCGCTGTATGCTGATACATTCGAACCTGCACAAGTTTACAAAGGATTCAGCAAATTAGTTGATTCAGCAGATGACTTGATTGTAGATATACCAGATACAGTTGATGTACTAGCACTTTTCTTAGCCAGGGCTGTGGTTGATGACATACTTCCCCCTGCATTTTTGAAGAAACATATGGCTTCCTTACCGAAAGATTCGAAAGGGGTTGAGGTATTGAAAAAAGCTGAGAAGAGCTATCTATCAGCACCTTTGCACGTGGAAATCATAGAACGGCGCTGGGGAGGTAGTAAGAATATGACAGTTGATGATGTGAAGGTTAGGATAAACAATTTTTTGAAAGAGTATGTAGTGAGTGGTGACAAGAAAGAAGTTTTTAGATGTATCAAAGATTTGAAAGTCCCTTTTTTCCATCATGAGATAGTGAAACGTGCTCTTATAATGGCAATGGAGAGGCGTCAAGCAGAAGGTCCACTACTAGACCTGTTGAAGGAGGCAGCTGAGGATGGTTTCATCAACTCTAGCCAGATGTCTAAAGGGTTCGGTCGGTTGATTGACACTGTTGATGACTTAACACTTGACATACCGAATGCACGCGAAGTACTGCAGCAGTTAATATCCAAAGCAGCTTCTGAGGGCTGGTTGTGTGTGTCATCCTTGAAATCATTTTCCGTGGACCCGGAAAAGAACTCAATTAAAGATAGTACTGCCATAAATTTCAAGACAAAGACTCAGTCTATTATTCAAGAGTACTTCTTATCCGGTGATATATCGGAGGTAAATAGTTGTCTAGAACAAGAGAATAGCAGCAACTGTGCTGAACTCAATGCAATCTTTGTCAAGAAACTGATAACACTGGCAATGGACAGGAAGAATAGGGAGAAAGAAATGGCTTCGGTGTTGCTTTCATCTTTGTGTTTCCCAGCTGATGATGTTGTAAGTGGCTTTGTGAAGTTAATAGAATCAGCAGATGACACTGCTCTTGATAACCCTGTTGTTGTTGAGGATCTTGCTATGTTTCTTGCTAGAGCAGTGGTGGATGAAGTCCTGGCACCACAACATCTTGTGGAGATTGGAACACAATGTTTGGGGCCGGATTCGATCGGAAGCAAAGTGCTTCAAATGGCTAAGTCAACTCTAAATGCTAGACTTTCCGGAGAGCGAATCTTGAGGTGTTGGGGTGGCGGGGGAAGCAGCCGGCCTGGCTGGGCAGTTGAGGATGTCAAGGACAAGATCGGAAAGCTTTTGGAGGAGTACGAGTCCGGAGGGGAAATAAGGGAGGCTTGTCGTTGCATGAAAGAGTTAGGAATGCCATTTTTCCACCATGAAGTTGTTAAGAAAGCTTTGGTAGCAATCATGGAAAAGAAGAATGAGAGATTGTGGGGTCTGCTCAAGGAGTGTTTCGAAACTGGCCTAATAACTATGAACCAAATGGTGAAAGGTTTCGGAAGAGTTGCAGAATCTCTTGATGACTTAGCTTTGGATGTCCCTGATGCTAAAAACCAGTTTGCATACTATGTTGAACAAGCAAAGATTCAAGGATGGTTGGAAAATTCAACTTCTTTCAGCAAACAGGAACATGCAAATGCAACAGAGAATGGAAATTTATAA 2175 0.4179 MDFGQGYISKEHRELHQSATESADPSSVSPLQISLKSPRSLKSPRSPKSPRSPKVQGKGSNLSPRHCKQSHSQIDGRPKKGGSGGKGTWGGLLETDDLNSLDPNDPNYDSTEDYDNLNEKKKNTDLDDYKKKATIIVEEYFTTDDVVATINEIRELGKPLYGYYFVKKLVSISMDRHDKEKEMAAILLSALYADTFEPAQVYKGFSKLVDSADDLIVDIPDTVDVLALFLARAVVDDILPPAFLKKHMASLPKDSKGVEVLKKAEKSYLSAPLHVEIIERRWGGSKNMTVDDVKVRINNFLKEYVVSGDKKEVFRCIKDLKVPFFHHEIVKRALIMAMERRQAEGPLLDLLKEAAEDGFINSSQMSKGFGRLIDTVDDLTLDIPNAREVLQQLISKAASEGWLCVSSLKSFSVDPEKNSIKDSTAINFKTKTQSIIQEYFLSGDISEVNSCLEQENSSNCAELNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPADDVVSGFVKLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLVEIGTQCLGPDSIGSKVLQMAKSTLNARLSGERILRCWGGGGSSRPGWAVEDVKDKIGKLLEEYESGGEIREACRCMKELGMPFFHHEVVKKALVAIMEKKNERLWGLLKECFETGLITMNQMVKGFGRVAESLDDLALDVPDAKNQFAYYVEQAKIQGWLENSTSFSKQEHANATENGNL* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1605 724 PANTHER PROGRAMMED CELL DEATH 4 1 715 IPR039778 GO:0045892
Lan11g1605 724 SMART ma3_7 596 705 IPR003891 -
Lan11g1605 724 SMART ma3_7 293 404 IPR003891 -
Lan11g1605 724 SMART ma3_7 428 539 IPR003891 -
Lan11g1605 724 SMART ma3_7 129 240 IPR003891 -
Lan11g1605 724 Gene3D - 416 571 - -
Lan11g1605 724 Gene3D - 117 270 - -
Lan11g1605 724 ProSiteProfiles MI domain profile. 595 714 IPR003891 -
Lan11g1605 724 ProSiteProfiles MI domain profile. 427 548 IPR003891 -
Lan11g1605 724 SUPERFAMILY ARM repeat 592 708 IPR016024 -
Lan11g1605 724 SUPERFAMILY ARM repeat 424 585 IPR016024 -
Lan11g1605 724 Pfam MA3 domain 597 704 IPR003891 -
Lan11g1605 724 Pfam MA3 domain 428 538 IPR003891 -
Lan11g1605 724 Pfam MA3 domain 296 403 IPR003891 -
Lan11g1605 724 Pfam MA3 domain 130 240 IPR003891 -
Lan11g1605 724 ProSiteProfiles MI domain profile. 128 249 IPR003891 -
Lan11g1605 724 ProSiteProfiles MI domain profile. 292 413 IPR003891 -
Lan11g1605 724 MobiDBLite consensus disorder prediction 1 120 - -
Lan11g1605 724 MobiDBLite consensus disorder prediction 1 19 - -
Lan11g1605 724 Gene3D - 579 711 - -
Lan11g1605 724 Gene3D - 279 410 - -
Lan11g1605 724 MobiDBLite consensus disorder prediction 20 69 - -
Lan11g1605 724 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 715 - -
Lan11g1605 724 SUPERFAMILY ARM repeat 288 409 IPR016024 -
Lan11g1605 724 SUPERFAMILY ARM repeat 122 286 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1605 Lan-Chr11 30907086 30910772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1605 587 705 Eukaryotic Initiation Factors Gene Family AT5G57870 31.148 2.50e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1605 - - lang:109352315 1246.88