Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1592 ATGAATAATAGTGAAGATGGCAATAACAACAATGGTGGTAGTCCTTTGACTAGTGCCTCTAATAACTCTACTAAATTCAGCAGTGAAGAGCACACTCACACTCACACTCACACTCACACTCATCAGCAGCTACAGCATTCTCATTCTGGACAAAGGAAAATGGTTGTGAGAAAGAGAATGGCTTCTGAGATGGAACCTACTCATACCATGTTGCCACACCCACATGGTAATAGGTTTCCTCGTCGAAGCAACAACGATAACATGTCATCATCACTACTAAAATGTTCTTCTTTATCTCCATCTGTAGAAAAAGCAACTAGTTTTAATAACAACTATCATTATAAAACTAGTTCTTCTTCAAGAGTAGATAATAACGTCGCTGTTGTTCCAAACCCCACTACTCCCAACTACTCCACTATGCTTCTACCCTCTTCTTCTTCTTCTACGACCATCGATCCAAACTATCACATTAGTCAGAATCAACTTACATCACCTCAAGTGTGTGGATTCTCGGGTTTGCCCCTATTTCCTGCATCTCAACAAAGAAATCATCATCACAATAGTAGTACTAGTATTGGTGCTAATGTTGAGGTGGTTGCTTCTCCTTCCATGGAAGACAATAACAACAACAACAACTCAGCAGCTACTGCTTGGATCGATGGTATATTGAAGGATCTTATCCATAGCTCCAACAGTGTTTCCATTCCTCAACTCATCAACAACGTTAGAGAGATTATATACCCTTGCAACCCCAACCTCGCTGTTGTTCTTGAATACAGGCTGCGTCTTCTCACCTCTCATGACAACAACGACTCATCCAACTCTGCAGAAGTTGGAAAAAACAATACTACCGAAGTGGGTGTGGTTTTGAACCAAAACCAAAGGCCCTTATTACCCTCAACTACCACTACTGTTAATGTTATACCTGATAATAATTTCCCACCAGATTCATCAGGTGCTGCTGCTCCTGTAGTTATGAATCAGATGTTGTCCAATTGGGTTGTGCTTCCAATCACCCATGACGGAACTTCTTCAGTGGTTCCTACTCCTTTACCACCAACTCATCATGATATCAGTAGTCATCAAGAGGAATGTTGTGATACTGTTGCTACTACTGCACCAGACACAACAAGAAAGAAAAAAGAAGAGATGCGGCAACAGAAGAAAGACGAAGAGGGCTTGCACCTGCTAACTTTGCTGCTTCAATGTGCAGAAGCAGTTTCATCTGAGAATCTTGAAGATGCTAACAAGATGCTGCTTGAGATTTCCCAGCTATCAACACCATTCGGTACATCAGCGCAGCGAGTTGCAGCTTATTTCTCAGAAGCCATATCAGCAAGGCTAGTAAGTTCATGCTTAGGAATATATGCAACCTTGCCTTCAACAATAGTATCCCACACTACTCACAAGGTAGCATCAGCATACCAAGTCTTCAACGGGATCAGTCCATTCGTCAAGTTCTCTCATTTCACAGCCAACCAAGCAATACAAGAAGCATTTGAGAGAGAGGATAGGGTACACATAATAGATCTAGACATAATGCAAGGGCTTCAATGGCCAGGATTGTTTCACATTCTAGCTTCAAGACCTGGTGGACCCCCTTATGTTAGACTCACTGGGCTTGGCACTTCAATGGAAGCACTTGAGGCAACAGGGAAACGTTTATCTGACTTTGCTAATAAACTTGGTCTTCCTTTTGAGTTCTCTCCTGTGGCTGATAAGGTTGGGAACCTTGACCCTGAAAGACTCAATGTTAGTAAAACAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCCCTCTACGATGTCACAGGCTCTGATACCAATACCTTATGGCTTTTGCAGAGGCTGGCACCGAAAGTGGTGACGGTGGTAGAGCAGGACCTGAGCAACGCAGGATCCTTCCTGGGAAGGTTTGTGGAAGCAATACACTACTACTCAGCACTATTCGATTCTCTTGGGTCAAGCTATGGTGAGGAAAGTGAGGAGAGACATGTGGTGGAACAGCAACTATTGTCCAAAGAGATTCGTAATGTTCTTGCAGTTGGGGGCCCATCTAGGACAGGAGACCTTAAGTTCCATAACTGGAGAGAAAAGCTTCAGCAGTGTGGGTTTAGAGGTATCTCACTATCTGGTAATGCTGCCACTCAAGCCAGTTTACTCCTTGGCATGTTCCCATCTGAGGGATATACCCTTGTGGAGGACAATGGTATCCTTAAACTTGGTTGGAAAGACCTTTGCTTGCTCACTGCTTCTGCTTGGAGACCTCCCTTCCACACTACTACTAGTACTACAGCCATTACCCATCATCATATAACTAATTAG 2325 0.4327 MNNSEDGNNNNGGSPLTSASNNSTKFSSEEHTHTHTHTHTHQQLQHSHSGQRKMVVRKRMASEMEPTHTMLPHPHGNRFPRRSNNDNMSSSLLKCSSLSPSVEKATSFNNNYHYKTSSSSRVDNNVAVVPNPTTPNYSTMLLPSSSSSTTIDPNYHISQNQLTSPQVCGFSGLPLFPASQQRNHHHNSSTSIGANVEVVASPSMEDNNNNNNSAATAWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLAVVLEYRLRLLTSHDNNDSSNSAEVGKNNTTEVGVVLNQNQRPLLPSTTTTVNVIPDNNFPPDSSGAAAPVVMNQMLSNWVVLPITHDGTSSVVPTPLPPTHHDISSHQEECCDTVATTAPDTTRKKKEEMRQQKKDEEGLHLLTLLLQCAEAVSSENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPSTIVSHTTHKVASAYQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFSPVADKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSKEIRNVLAVGGPSRTGDLKFHNWREKLQQCGFRGISLSGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHTTTSTTAITHHHITN* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1592 774 ProSiteProfiles GRAS family profile. 387 755 IPR005202 -
Lan11g1592 774 Pfam GRAS domain family 397 755 IPR005202 -
Lan11g1592 774 MobiDBLite consensus disorder prediction 1 53 - -
Lan11g1592 774 PANTHER PROTEIN SCARECROW 126 757 - -
Lan11g1592 774 MobiDBLite consensus disorder prediction 1 27 - -
Lan11g1592 774 MobiDBLite consensus disorder prediction 67 88 - -
Lan11g1592 774 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 126 757 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1592 Lan-Chr11 30698199 30701715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1592 376 758 GRAS Transcription Factor Family AT5G41920 55.330 3.03e-144 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan11g1592 GRAS 1.3e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1592 - - lang:109325321 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1433 7 19756949 19759785 Lan11g1592 11 30698199 30701715 LSH
Lan11g1592 11 30698199 30701715 Lan13g1222 13 17778023 17781004 LSH