Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1581 ATGGCTACTAACACATTAATGAGTTCTGCTATCTCAGCTTTCCCATCTCTTCTTTCTTCCTCAAAATCAAGATTTACCACTTCATTTCCACTTTCATGCATTGGTTCCAATGCATCAAGTCGTTTTTCCATGTCTGCTGAGTGGATGCCTGGTGAGCCTAGACCACCTTACCTTGATGGTTCAGCTCCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTGGAGAGATTCAAAGAGTCAGAACTCATTCATTGCAGATGGGCTATGCTTGCTGTTCCAGGAATTTTGGTACCAGAGGCATTGGGTTTAGGTAACTGGGTCCAAGCTCAAGAATGGGCTGCAGTTCCTGGAGGCCAAGCAACTTACCTAGGCAACCCTGTTCCATGGGGCACCCTCCCTACAGTTCTTGCCATTGAATTCCTTTCTATTGCCTTTGTTGAACACCAAAGGAGCATTGAGAAAGACCCTGAGAAGAAGAAATATCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTTGCAGAGAACAAAGTCAAAGAAGTTAAGAATGGACGTCTTGCTCTATTGGCTTTTGTGGGATTCATTGTTCAACAATCAGCTTACCCAGGAACTGGACCTTTGGAGAACTTGGCTACTCACTTGGCCGATCCGTGGCACAACAACATTGGAAATATCCTTATTCCAAAATAG 723 0.4467 MATNTLMSSAISAFPSLLSSSKSRFTTSFPLSCIGSNASSRFSMSAEWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTVLAIEFLSIAFVEHQRSIEKDPEKKKYPGGAFDPLGYSKDPKKFAENKVKEVKNGRLALLAFVGFIVQQSAYPGTGPLENLATHLADPWHNNIGNILIPK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1581 240 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
Lan11g1581 240 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Lan11g1581 240 SUPERFAMILY Chlorophyll a-b binding protein 38 237 - -
Lan11g1581 240 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 234 - -
Lan11g1581 240 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 234 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1581 Lan-Chr11 30026028 30029423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1581 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 79.798 1.59e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1581 K08907 - fve:101299419 433.335