Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1573 ATGGATTCTGTGGGTAGGGTATCAGAAAAGTGCTTAGATTCTCAATTATGGCATGCTTGTGCTGGTTCCATGGTTCAAATGCCACAGCTCAATTCAGAAGTTTTCTACTTTCCTCAGGGCCATGCAGAACATGCCCTTTGCAAAGTTGATTTCGGGAACAAACCAATTTCACCACTCATCCTTTGCAGGGTTAATGCCATCAAATTCATGGCAGACCTTGACACTGATGAGGTTTATTTGAAGTTGAGGTTGACCCCTTTGAGAGACAATGAAATTGATTTGAAAGATGATTGTTTCGTAGGGATTAGAGGGGTTGTTGAGAGTCAAGAGAAACCAGTTTCGTTTACCAAGACATTGACTCAATCTGATGCCAACAATGGTGGAGGGTTTTCGGTGCCTCGTTATTGCGCTGAGACTATCTTCCCGAAGCTGGATTACTCTACTGTTGAGCCTCCTGTTCAGACCATTATTGCCAAGGATGTGCATGGAGAGTGCTGGAAGTTCCGGCATATCTATCGTGGGACACCGAAGAGGCATCTTTTGACCACCGGATGGAGCAATTTTGTGAACCACAAGAAGCTTGTGGCAGGGGATTCTGTCCTGTTTTTACGGGCTGAGAATGGTGATCTTTGTGTTGGGATAAGGAGGGCTAAGAAAGGGATTGGTGGAGGGAGTGAGTTATCATCATCTTGTTGGAACACCAACCAATTAGCACCTTTACTATTTGGTGGTGGAAATGAAAACAACAAAATGTTGATGAGGAGAAAAATTGGTGAAAAATTGATGGGAAAAGTGGAAGCTGAATCTGTTATTGAAGCTGTGAATTGTGCTGTTAATGGAAGGCCCTTTGAGGTTGTTTACTATCCAAGGGCTAGCAAACCCGAGTTTTGTGTTAAGGCCTCTGCTGTTAGGGCTGCAATGCAAATACAGTGGTGTTCTGGGATGAGATTCAAGATGCCCTTCGAAACCGAGGATTCTTATAGGATCGGCTGGTTTATGGGAACCATATCTTCTGTCCAGGTTGTCGATCCCATTCGTTGGCCTAATTCGCCATGGCGGTTTCTACAGGTTGTGTGGGATGAACCACATTTACTCCAAAATGTTAAGTGTGTAAACCCTTGGTTGGTTGAAGTAGTCTCAAACATCCCCAATTTCCATCTCTCCCCATTCTCACCACCAAGCAAGAAACCGAGGTTTCCACAGACCGTGGATTTTCACCTCGTCGACCAACTTCCGATCTCGTCATTTTCCAACAATCTTCTTAAACATACTAACTCTGTATGTAAGATTCAAGGCAAAAGTTCTGCAGGCATACAGGGAACCAGGCATGCTCAATATGGACTGTCTCCATCCAATTTCCCCACCAAAACGCTGCAGCCAGATGTGCTTCCTAGTGCACACCCATGGCTTAATCATTCAGTGCAACCTCGTAGGCCTCCTTGGGACACCTACAAGAGCGGTCCTAAGAATAATGTTGATATATCATGCTTGTTGACTGCGGGAAATACAGCCCAGAGTTCGAAGGAACCTGTAAAAGGGAATTCATCTCACATCTTGTTGTTCGGAAAACTCATTCACACTGAACAGGAGCATAATTCTAACATTTTCTCGGCTGGAAGAAATGGGAATAGTTCAACTGAAGCTACTTTGCATAAGACTTCAAATGCTTCTGAAGGATTGGATTCAGCTTCGCTTCAAAATAGTCATATAGAGAATTCTTCCGATGGAGGGTCTCCATGGTACAAAGATCTGCAGAAATCTGATCTTCGAACCAGAACCAAAAACGTTAACCGATTGTGTTTGGCGCTGTAA 1812 0.4409 MDSVGRVSEKCLDSQLWHACAGSMVQMPQLNSEVFYFPQGHAEHALCKVDFGNKPISPLILCRVNAIKFMADLDTDEVYLKLRLTPLRDNEIDLKDDCFVGIRGVVESQEKPVSFTKTLTQSDANNGGGFSVPRYCAETIFPKLDYSTVEPPVQTIIAKDVHGECWKFRHIYRGTPKRHLLTTGWSNFVNHKKLVAGDSVLFLRAENGDLCVGIRRAKKGIGGGSELSSSCWNTNQLAPLLFGGGNENNKMLMRRKIGEKLMGKVEAESVIEAVNCAVNGRPFEVVYYPRASKPEFCVKASAVRAAMQIQWCSGMRFKMPFETEDSYRIGWFMGTISSVQVVDPIRWPNSPWRFLQVVWDEPHLLQNVKCVNPWLVEVVSNIPNFHLSPFSPPSKKPRFPQTVDFHLVDQLPISSFSNNLLKHTNSVCKIQGKSSAGIQGTRHAQYGLSPSNFPTKTLQPDVLPSAHPWLNHSVQPRRPPWDTYKSGPKNNVDISCLLTAGNTAQSSKEPVKGNSSHILLFGKLIHTEQEHNSNIFSAGRNGNSSTEATLHKTSNASEGLDSASLQNSHIENSSDGGSPWYKDLQKSDLRTRTKNVNRLCLAL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1573 603 ProSiteProfiles B3 DNA-binding domain profile. 115 218 IPR003340 GO:0003677
Lan11g1573 603 Gene3D - 113 218 IPR015300 -
Lan11g1573 603 SMART B3_2 115 218 IPR003340 GO:0003677
Lan11g1573 603 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 570 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan11g1573 603 SUPERFAMILY DNA-binding pseudobarrel domain 107 217 IPR015300 -
Lan11g1573 603 Pfam B3 DNA binding domain 115 217 IPR003340 GO:0003677
Lan11g1573 603 Gene3D - 310 384 - -
Lan11g1573 603 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan11g1573 603 PANTHER AUXIN RESPONSE FACTOR 16 7 570 - -
Lan11g1573 603 CDD B3_DNA 114 216 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1573 Lan-Chr11 29475320 29478241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1573 8 587 B3 DNA Binding Superfamily AT4G30080 53.987 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan11g1573 B3 2.8e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1573 - - gmx:100803053 788.875