Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1571 ATGAAGAACCAAATAGAAAAAGAAATGGGTTCCATAGAGAAAAGAGAGGTGAAAATCCCAACCAAAGAAGAAGATGACCAAGCATGCATCCATGCAATGGTATTATCCAGTTTCCAAGTGTTCCCTTCAGTTCTAAATGCTGCTATTGATCTGAATCTATTTGAGATCATTTCAGAATCAGCACCACTAGGTGAATATGTGTCAGTCTCTGACATTGCCTCTAAAATTCCAACACAACATCATGAATTGGACAAAAGGGTAGACAGAATGCTACGTGTTCTTGCCACTTTCTCACTTCTGAATTCAACTACTAACACAAACAAAGATGGCATGGTTGAGAGGTTTTATAGTCTCTCACTTACTGGCAAATATTTTCTAAGAAATCAGACTGAGAATCTGGCTTCTTTCACAAACTTGACCAGCCATCCATCTCAAGTAAAGGTTTGGCTAAATATGAAGGATGCAATTCTTGATGGAGGAATAGACCTATTCAAGAAGGTTCATGGAATAACCATGTGGGAAAACATGGAGAAGGACACAAAACTGAATCACACCTTCAACAAGGCAATGACAGGCATGTCAGCAGTACAGATGAGGAAGTACTTGGAAGTATATGATGGATTTCAAGGAATATCAACATTAGTTGATGTTGGAGGAGGTACTGGTCAGTGTCTCAAAATGATACTCTCCAAATACCCTAATATAAAGGGAATTAACTTTGATTTGCCCCAAGTCATACAACATGCCTTACCCTATCCAGGAATTGAGCATGTTGGAGGAAACATGCATGAAAGTGTTCCAAGTGGTGATGCAATAATGATAAAGGCTACTTGTCATAATTGGTCAGATGAGACATGCATAACAATATTGAAAAAATGTTATAAAGCACTTCCAGAAAATGGAAAAGTGATCATATTGGACATGATTATGCCTGAAGAAATAGATTCAAGTGATGCCACTAAGTATGTGTCTATAATTGATAACACAATGTTTATTCTAGCTGGAGGGAAGGAAAGAACAGAGAAAGAATTTGAAAAGCTATGCGAAGAGTCTGGATTCTCAAGATCTGTGGTTGTTTGTCTTGCCCTTTCTGTTTTTGGAGTCATAGAATTTTATAAATAA 1122 0.3743 MKNQIEKEMGSIEKREVKIPTKEEDDQACIHAMVLSSFQVFPSVLNAAIDLNLFEIISESAPLGEYVSVSDIASKIPTQHHELDKRVDRMLRVLATFSLLNSTTNTNKDGMVERFYSLSLTGKYFLRNQTENLASFTNLTSHPSQVKVWLNMKDAILDGGIDLFKKVHGITMWENMEKDTKLNHTFNKAMTGMSAVQMRKYLEVYDGFQGISTLVDVGGGTGQCLKMILSKYPNIKGINFDLPQVIQHALPYPGIEHVGGNMHESVPSGDAIMIKATCHNWSDETCITILKKCYKALPENGKVIILDMIMPEEIDSSDATKYVSIIDNTMFILAGGKERTEKEFEKLCEESGFSRSVVVCLALSVFGVIEFYK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1571 373 PIRSF O-mtase 9 373 IPR016461 GO:0008168
Lan11g1571 373 CDD AdoMet_MTases 213 305 - -
Lan11g1571 373 Gene3D - 10 125 IPR036388 -
Lan11g1571 373 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Lan11g1571 373 Gene3D Vaccinia Virus protein VP39 126 373 IPR029063 -
Lan11g1571 373 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 373 - -
Lan11g1571 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 373 IPR016461 GO:0008168
Lan11g1571 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 371 IPR029063 -
Lan11g1571 373 SUPERFAMILY "Winged helix" DNA-binding domain 23 129 IPR036390 -
Lan11g1571 373 PANTHER O-METHYLTRANSFERASE 13 373 IPR016461 GO:0008168
Lan11g1571 373 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1571 Lan-Chr11 29386725 29392698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1571 9 373 Monolignol Biosynthesis Gene Families AT5G54160 46.049 7.72e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1571 - - ag:AAB48059 410.994