Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1569 ATGGGCAGGTATGAGTACACAACTACAACATTTTTCCTTAGTATAATGTTTTTATTTTGTTTATGTCCCATGGTGTTATCTATGCTATCTCAAAACCAAACAAACACAATGATCACACTCTCTCAGATTCTTAATACTTCTGTTCCAATATGGAATAGCATTAAGGAACCAAATCCATGTTTATGGAAAGGAGTCACTTGTGACACTAGTGGTTCTTTTGTGACCATGATTACTCTATCTAAGCATTCTCTTACTTCTAATAACTTTATGAATGTTCTTTGCCAAATTGAAACTTTGGAGTATCTTGATGTCTCCAACAACCAAATCACTTCAATCCCAGATGGGTTTTTAACTGAATGTGGAAAGAATAAAGGGTTGAACTTGCTGAATTTTACTAGAAACAATTTGCATGGTGTTTTACCAACTTTTCATGGTTTTGATGGGTTGGAATATTTGGATATGTCTTTCAATAACTTGGGAGGGACTATTGGTTTAGAGCTAGATGAACTTGTTAGTCTCAAGAGTTTGAATCTCAGTTTCAATTCCTTCAATGGGTCTCTTCCTATACACCTTGGAAAGTTGATGATTTTGGAGAAGCTTATGCTTTCTCAAAATAATTTTAGTGGAAAAATCCCTGATGAGATATTGACTTATAAAAAATTGACTGTGATTGATCTTAGTGGAAATCATCTTTCAGGGACTATTCCTAGTAATATTGGAGAGCTACCAAAATTGGAAAGTTTGATTCTTTCTTGTAATTCTCTTGATGGTGGAATTCCAATATCACTCAGGAATATCACAACCCTTACAAGATTTGCAGCAAATCAAAACAATTTCATTGGTGCTGTACCTATAGGGATTACAACATATCTTACAAGTTTGGATCTTAGTTATAATAAGTTAGAGTCCATTCCAGAAGACCTTTTATCTCCATCAAAATTGCAGGTTGTAGATTTTTCCACTAATAAGTTATCTGGGCCATTACCGGTTAATATTTCTTCTAGCTTAACCAGGTTGAGATTAGGGGGCAATTTTTTTACTGGAAGCATTCCTTCTGGTAGTTTTCCGAGAGCTAAAAATTTGACATACTTGGAGCTAGAAAACAATCACTTGACAGGAGTTATACCGGTCGGGTTGGGTTCGTGCCAGAATTTAGCATTGCTGAGCTTAGCTAAGAACCAGTTGAGTGGAGTATTGCCTGCAGAGCTTGGTAATCTGAGACAGCTTCAAGTCTTGAAGCTTCAAATGAACAAATTTAACGGTACAATCCCGGTTCAAATTGGCCAACTACAGAAGCTTTCAACATTGAATTTGAGCTGCAATTCTCTAGAGGGGTCAATTCCATCCGTGATGTCAAGCTTGAGCAGCCTTACTGTCCTAAACTTGCAACAAAATAATCTGAGTGGTTCGATACCGACATCGATTGGAAACTTAAGATTTCTTATAGAACTCCAACTTGGGAAAAACCAACTAAGTGGTGTGATTCCAAGCATGCCATTGAGTCTACAAATTGCCTTGAATCTTAGTAGCAACCTCTTTAGTGGACCTATTCCAAGCAGCCTTGGTTATTTGACTACCCTGGAAATCTTGGATCTCTCAAATAACAGGTTTTCTGGTGAAATTCCGAAAAGTCTAGGTGGCATGCCAGCTTTGACACAGATTATACTTTCAAACAATCAGCTATCTGGTATGATTCCAAAATTTTCCCCATATGTCCATGTTGAATCAAAAGGAAATACAAATCTGGTAAACAATACTGGACAAGACAATACAACACCGAACGTTGCCCCACGGTCTACTAAAACAGGAATATCCGTTGTTGCCGCAGTTCTCATTTCAATTGCAGCATCTATTTTTCTCATTGCCCTTGTCGCGCTGATTATTGTATTAGTCTCGCGGAACATGTATAAGGTTAATGATGAGCATATACAGCCAAGCGAAGATAGTCACCTTCCTCGGGTCATCCATAGCAATTTGTTTACTTCACATGTGATCCATAGAGCAAACATTGACTTCTCCAAGGCCATGGAAGCTGTTGCTGTAACATCAAATGTTACTCTGAAGACTAGGTTCTCGACTTACTATAAGGCCATCATGCCGTCTGGATCAATCTATTTTGTCAAGAAGTTGAACTGGAGCGACAAGATATCGGCAGCGGCCAGCAGTAATGATAAATTTGTGATACAGCTAGAAATGTTGGCAAAGTTGAACAATTCAAATGTCATGACTCCTTTGGCCTATGTTATTTCCAACGACATTGCTTACGTATTATACGAATTTGTCTCGAATGGCTCCCTATTTGATGTTCTTCACGGAAGCATGGCAGGATCTCTAGATTGGGCTAGCCGATATAGCATAGCTGTTGGTGTTGCTCAGGGTATTTCTTTTCTTCATGGACATGCATCTAGTTCAATACTTCTCCTTGACCTTTCAAGTAAAAGTATTATGCTGAAGTCCTTCAAGGAGCCTCTAGTTGGGGATATCGAACACTACAAGGTGATTGACCCCTCAAAGAGTACAGGGAATTTTTCTGCTGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAATATGCATACACAATGACAGTAACAATGGCTGGGAATGTCTACAGCTTCGGTGTCATTCTTCTCGAGTTGCTGACCGGAAAACCTGCAGTGACCGAGGGGACAGAATTGGTGAAGTGGGTTTTGCATCATTCAACAAACAAAGATTACATTCTTGATTTTAATGTCAAGAGAACATCACAAGCTGTCAGAAACCAAATGCTAGCAGTTCTTAAAATTGCTCTTGTTTGTGTTAGTACATCTCCTGAAGCAAGACCAAAGATGAAGAGTGTGCTTAGGATGCTCCTAAATGCTAGATGA 2865 0.3874 MGRYEYTTTTFFLSIMFLFCLCPMVLSMLSQNQTNTMITLSQILNTSVPIWNSIKEPNPCLWKGVTCDTSGSFVTMITLSKHSLTSNNFMNVLCQIETLEYLDVSNNQITSIPDGFLTECGKNKGLNLLNFTRNNLHGVLPTFHGFDGLEYLDMSFNNLGGTIGLELDELVSLKSLNLSFNSFNGSLPIHLGKLMILEKLMLSQNNFSGKIPDEILTYKKLTVIDLSGNHLSGTIPSNIGELPKLESLILSCNSLDGGIPISLRNITTLTRFAANQNNFIGAVPIGITTYLTSLDLSYNKLESIPEDLLSPSKLQVVDFSTNKLSGPLPVNISSSLTRLRLGGNFFTGSIPSGSFPRAKNLTYLELENNHLTGVIPVGLGSCQNLALLSLAKNQLSGVLPAELGNLRQLQVLKLQMNKFNGTIPVQIGQLQKLSTLNLSCNSLEGSIPSVMSSLSSLTVLNLQQNNLSGSIPTSIGNLRFLIELQLGKNQLSGVIPSMPLSLQIALNLSSNLFSGPIPSSLGYLTTLEILDLSNNRFSGEIPKSLGGMPALTQIILSNNQLSGMIPKFSPYVHVESKGNTNLVNNTGQDNTTPNVAPRSTKTGISVVAAVLISIAASIFLIALVALIIVLVSRNMYKVNDEHIQPSEDSHLPRVIHSNLFTSHVIHRANIDFSKAMEAVAVTSNVTLKTRFSTYYKAIMPSGSIYFVKKLNWSDKISAAASSNDKFVIQLEMLAKLNNSNVMTPLAYVISNDIAYVLYEFVSNGSLFDVLHGSMAGSLDWASRYSIAVGVAQGISFLHGHASSSILLLDLSSKSIMLKSFKEPLVGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLHHSTNKDYILDFNVKRTSQAVRNQMLAVLKIALVCVSTSPEARPKMKSVLRMLLNAR* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1569 954 PRINTS Leucine-rich repeat signature 291 304 - -
Lan11g1569 954 PRINTS Leucine-rich repeat signature 524 537 - -
Lan11g1569 954 SUPERFAMILY L domain-like 294 571 - -
Lan11g1569 954 PANTHER F12K21.25 10 951 - -
Lan11g1569 954 SMART LRR_typ_2 218 242 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 406 430 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 170 194 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 96 119 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 524 547 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 291 311 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 454 478 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 359 382 IPR003591 -
Lan11g1569 954 SMART LRR_typ_2 548 570 IPR003591 -
Lan11g1569 954 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Lan11g1569 954 SUPERFAMILY Protein kinase-like (PK-like) 690 950 IPR011009 -
Lan11g1569 954 SUPERFAMILY RNI-like 77 396 - -
Lan11g1569 954 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 951 - -
Lan11g1569 954 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Lan11g1569 954 Gene3D Ribonuclease Inhibitor 189 286 IPR032675 -
Lan11g1569 954 Pfam Leucine Rich repeat 289 301 IPR001611 GO:0005515
Lan11g1569 954 Gene3D Transferase(Phosphotransferase) domain 1 761 954 - -
Lan11g1569 954 Gene3D Ribonuclease Inhibitor 287 592 IPR032675 -
Lan11g1569 954 Coils Coil 947 954 - -
Lan11g1569 954 ProSiteProfiles Protein kinase domain profile. 680 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1569 954 Gene3D Phosphorylase Kinase; domain 1 655 760 - -
Lan11g1569 954 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Lan11g1569 954 Pfam Leucine rich repeat 506 561 IPR001611 GO:0005515
Lan11g1569 954 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
Lan11g1569 954 Pfam Leucine rich repeat 360 418 IPR001611 GO:0005515
Lan11g1569 954 ProSiteProfiles Leucine-rich repeat profile. 98 118 IPR001611 GO:0005515
Lan11g1569 954 Pfam Protein kinase domain 691 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1569 Lan-Chr11 29356653 29360350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1569 149 954 Receptor kinase-like Gene Family AT2G41820 38.526 5.05e-158 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan11g1569 Pkinase 7.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1569 - - gmx:100796647 1198.73