Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1566 ATGGAAGATTCGGAGGAAGATGAGCTTCTAAATCTTAGCCTTTCAGTTTCTTCTGGTAGGGAAAGAAAAAAGAAGGGAAGGACAATAAGGGCTAATAATTCTAACTCTATTATTAGTCCTATGATGAACTCCTATGAAGGGAAGATTTTTTGGCTCCTCCAAATGAGGGAGCAGATGCTAAGACAAAACCATCATCATAGAAAGAAAGGAGTGATTGAAGATGGAAATGGGTTTCCTTTGATCCACTTGCTTCTCACAACTGCCACAGCTATTGATGAGAAAAACTTAGGTACATCACTAGAGAATCTCACAGAACTTTATCAAACAGTTTCCCTAACTGGTGACTCAGTTCAAAGAGTAGTGGCATATTTTGCTGATGGTCTTGCTGCAAGGCTTCTCACAAGAAAATCACCCTTCTATGACATGCTCATGGTGGAACCTACAAGTGAGGAAGAGTTTCTAGCATTCACAGATATCTATAGGGTCTCACCTTATTACCAATTTGCACACTTCACTGCAAACCAAGCTATCTTAGAAGCCTTTGAGGCTGAAGAAGAAAGGAACAACCGTGCACTACATGTCATTGATTTTGATGTTTCCTATGGTTTTCAATGGCCTTGTCTCATTCAATCACTTTCAGAGAAGGCAACAAGTGGAAACCGCATATCACTCAGGATAACTGGATTTGGCAACATGAAAGAGCTGCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGTTTTGGTAACCTTGTGTTTGAGTTCCAAGGGTTGTTAAGAGGGTCAAGGATTATTAACCTAAGAAAAAAGAAGAATGAAACTGTGGCTGTGAACTTGGGTTCTTATTTGAACACTTCGAGTGGTTTTATGAATATCTTTGACACATTGGGATTTGTTCATTCTCTTAACCCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTATCAGGAATCTTAGGACCTTCTTGTCAAGGTTCACCGAGTCCTTGCACTACTTTGCAGCCATGTTTGATTCACTTGATGATTGCCTTCCACTTGAGAGCACTGAGAGGCTGAGAATTGAAAAGAAGCTTCTTGGAAAAGAGATCAAACATGTACTCAACTATGACATGGATAATGGTTTTGATTGCCAAAAATATGAGATAAATGAGACACTAAAAGCAAGAATGGAGCATCATGGGTTTGTAGGAACAAAAATAAGCTCAAAATCTATGATCCAAGCAAAGCTACTTCTGAAGATGAGGACACATTATTGTTCATACCAGATTGAAGAAGAGGATGGTGATGGATTCAGAATTTCTGAAAGGGATGAAGGAAGAGCTATCTCTTTGGGGTGGCAAAATAGGTTTCTTCTTACAGTCTCAGCATGGAAACCACTCTGA 1383 0.3962 MEDSEEDELLNLSLSVSSGRERKKKGRTIRANNSNSIISPMMNSYEGKIFWLLQMREQMLRQNHHHRKKGVIEDGNGFPLIHLLLTTATAIDEKNLGTSLENLTELYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMVEPTSEEEFLAFTDIYRVSPYYQFAHFTANQAILEAFEAEEERNNRALHVIDFDVSYGFQWPCLIQSLSEKATSGNRISLRITGFGNMKELQETESRLVSFSKGFGNLVFEFQGLLRGSRIINLRKKKNETVAVNLGSYLNTSSGFMNIFDTLGFVHSLNPSIVVLVKQEGIRNLRTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKHVLNYDMDNGFDCQKYEINETLKARMEHHGFVGTKISSKSMIQAKLLLKMRTHYCSYQIEEEDGDGFRISERDEGRAISLGWQNRFLLTVSAWKPL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1566 460 Pfam GRAS domain family 80 458 IPR005202 -
Lan11g1566 460 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 458 IPR005202 -
Lan11g1566 460 ProSiteProfiles GRAS family profile. 71 458 IPR005202 -
Lan11g1566 460 PANTHER OSJNBA0084A10.13 PROTEIN 8 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1566 Lan-Chr11 29326566 29328142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1566 83 458 GRAS Transcription Factor Family AT2G04890 32.987 1.70e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan11g1566 GRAS 1.3e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1566 - - gmx:100813979 704.131