Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1554 ATGGGTAGAAAAGGTAATTGGTTTTCTGCAGTGAAGAAAGCTTTTAGTTCAGATTCCAAAAAAGATAAGAAAAGCCACAAGTCAAAGAAAAAATCTAGTAGGCATCACAAAGATTCAGAACCTGCATTTGAAGTAGCTCAAGTTGCTCTTGCTCCCCCTCTTCCACAAATACAAGATGTTAAATTGGCTGAGGCGGAGAATGAGCAGAGCAAGCATGCTTATTCTGTGGCCCTTGCCACAGCTGTTGCAGCAGGAGCTGCTGTTGCTGCTGCTCAGGCCGCTGCGGAGGTTGTTCGTCTCACAAGTATGCCTCATTACCATGGACAGACTAAGGAAGAAGTAGCAGCTATTAAGATTCAGACGGCCTTCCGTGGATATATGTCGAGAAGGGCGCTGCGTGCTTTAAAAGGTTTGGTGAGATTGAAAACAATGATACAAGGGCAATCAGTTAAACAGCAAGCAACTAGCACCTTACGGTGCATGCAAACTCTCGCAAGACTTCAGTATCAGATCTGCGAAAGGAGAATTAGAATGTCTGAGGAAAACCGGGATCTTATGAGGCAACTACAACAGAAACATGAAAAGGAACTTGAGAAGTTGCAAGCTGCTCAGGTTGAAGAACAATGGGATGATAGCTGGCAAACAAAGGAGCAAATTGAAACAAAATTCTTGCACAAGCAAGAAGCTGCTTTGAGAAGAGAGAGAGCTCTGGCCTATGCATTCTCACATCAGAAAATGGCGAAGAACTCTTCAAAATCAGCAAATCTCACATTTATGGATCCAAACAATCCTCATTGGGGATGGACTTGGCTAGAGCGATGGATGGCAGCCCGCCCATGGGAAGGCCAAAGCACTATGGATCCAAACGATTACGCACCAATAAAGAGTGCAGCAAGTCATGTGAGCAAGGTTTCCCGTGTTGGCCGAAAAGGAAGCCAATCTGGAAGTCACAATTCCCCTTCAACTCCAGTTTCAAAGGCTCCATCTTCATCTGTTAACGGAAAGGCAAGGCCATCATGCTCAAAGGGCAGTGGCTGGGGTGATGAAGACTCGAGAAGCATGCTCAGCGTCCAGTCAGAACGCTATCGCAGGCATAGCATTGCTGGATCATCAGCAAGAGATGATGAGAGCCTTGCAAGCTCACCTGCATTTCCCAGTTACATGGCCCCAACGAGTTCGACAAAGGCCAGAACAAGAACACAAAGACCATCACCACTTAGTATGGAGAAAAATGGAACACCTGACAAAGGAGCTGCTATTTCATCAAAGAAGCGCCTTTCTTTCCCTGCTTCTCCAGTTGCCTCAAGAAGGCACTCTGGTCCTCCTAAGGTGGAAATGTTCCAATAA 1347 0.4603 MGRKGNWFSAVKKAFSSDSKKDKKSHKSKKKSSRHHKDSEPAFEVAQVALAPPLPQIQDVKLAEAENEQSKHAYSVALATAVAAGAAVAAAQAAAEVVRLTSMPHYHGQTKEEVAAIKIQTAFRGYMSRRALRALKGLVRLKTMIQGQSVKQQATSTLRCMQTLARLQYQICERRIRMSEENRDLMRQLQQKHEKELEKLQAAQVEEQWDDSWQTKEQIETKFLHKQEAALRRERALAYAFSHQKMAKNSSKSANLTFMDPNNPHWGWTWLERWMAARPWEGQSTMDPNDYAPIKSAASHVSKVSRVGRKGSQSGSHNSPSTPVSKAPSSSVNGKARPSCSKGSGWGDEDSRSMLSVQSERYRRHSIAGSSARDDESLASSPAFPSYMAPTSSTKARTRTQRPSPLSMEKNGTPDKGAAISSKKRLSFPASPVASRRHSGPPKVEMFQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1554 448 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Lan11g1554 448 Gene3D iswi atpase 110 151 - -
Lan11g1554 448 MobiDBLite consensus disorder prediction 287 448 - -
Lan11g1554 448 MobiDBLite consensus disorder prediction 1 43 - -
Lan11g1554 448 SMART iq_5 111 133 IPR000048 GO:0005515
Lan11g1554 448 MobiDBLite consensus disorder prediction 384 408 - -
Lan11g1554 448 Coils Coil 175 206 - -
Lan11g1554 448 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Lan11g1554 448 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 445 - -
Lan11g1554 448 MobiDBLite consensus disorder prediction 306 338 - -
Lan11g1554 448 PANTHER IQ-DOMAIN 5-RELATED 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1554 Lan-Chr11 28534721 28539891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1554 1 445 IQD Protein Family AT5G03040 47.558 4.04e-121 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1554 - - lja:Lj0g3v0301539.1 535.413