Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1549 ATGGCAAGGATCAAACCTCAGGCTTTGCTGCAGCAAAGCAAAAGGAAGAAAGGGCCTTCACGCATAAGTGCCACGACTATTATATTTTACTCATTGATTCTTGTCTTGTTTGGGTTCTTCTTGTTCACAACGTATAGACATTGGTCTAACAGGTCAAGATTTCGATCAGAGAATCAAATGTCAGTCTCAGAGGCCGAAAGTACTTCTGGAGACCCGAGGAAATCTGACCTACCTGGATACGCTGTTTTGAATACCTCTAAAGGCTCTATTATAATAGAACTGCACAAGGAAAGTACCCCTGAAGTTGTTGATGAATTCATTGACTTGTGTCAAAAAGGGCACTTCAAGGGGATGCTTTTCCACCGAGTGATTAAACACTTTGTGATTCAGGCAGGGGATAATGAAGGAGCAGGAGGTACTGAAGATTGGAACCTGAGAGGAAAGCAACATACAAGTGTGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGCAAACATTTAAACAAAAGATTTGATCTTTTAATTACAACTGCACCGATACCCGATTTAAACGAGAAGATTATTGTGTTTGGGCAAGTCATCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGACACAGATGAACACTACAAACCTAAAGTTTCTATTGGTATACTTGATGTGTCTCTTACACAGAAGATATGA 693 0.4055 MARIKPQALLQQSKRKKGPSRISATTIIFYSLILVLFGFFLFTTYRHWSNRSRFRSENQMSVSEAESTSGDPRKSDLPGYAVLNTSKGSIIIELHKESTPEVVDEFIDLCQKGHFKGMLFHRVIKHFVIQAGDNEGAGGTEDWNLRGKQHTSVKHEAFMLGTSKGKHLNKRFDLLITTAPIPDLNEKIIVFGQVIKGEDVVQEIEEVDTDEHYKPKVSIGILDVSLTQKI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1549 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Lan11g1549 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Lan11g1549 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Lan11g1549 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Lan11g1549 230 MobiDBLite consensus disorder prediction 56 78 - -
Lan11g1549 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 226 IPR002130 GO:0000413|GO:0003755
Lan11g1549 230 Gene3D - 67 230 IPR029000 -
Lan11g1549 230 CDD cyclophilin 82 223 - -
Lan11g1549 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
Lan11g1549 230 SUPERFAMILY Cyclophilin-like 77 226 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1549 Lan-Chr11 28238121 28243270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1549 71 226 U-box Gene Family AT5G67530 32.515 1.04e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1549 - - gmx:100781538 395.201