Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1540 ATGGTGAAGCAAAATCAATCTACAATATCTTTTCTTCTTCTTCTTCTTCTCCCTTTGCTTCTTATCCTTGCTATCTCCACAGAAGTTGAAGGGGCAAATAAACTATTTGTTTTTGGAGACTCCTATGTTGACACAGGGAATTTCCATAACTCGGGATCTTATAAGCCACCTAGTGGAATGACTTATCCTGGTGCTCCTGCTGGAAGATTTTGTGATGGTCGTGTCCTCACTGATTACATTGCATCTTTTCTGAAAATTGATCCCCCGACGCCGTATTCGTTGAAAAATTCCTCAAATTTTCAAAATGGTATAAACTTTGCTTATGGAGGGACGGGATTTTTCCAGACTCTGGTTGATGGACCAAACGTCAGTGTCCAAATCAGCTCATTTGAACAGCAAATCCAACAAAATGTCTATAACAAATCTGACCTTGAAACATCACTTGTTCTTGTCAACTCTGGTGCCAATGATTATACAACATTTGCTCTAAAAAATATGAGCTTTCTGGAAATAGAAAAATTCACTGAATCCCTTGTGAAGGAAGTGGTAGTAAATCTTAGACGTATTCAGAGCTTAGGGGCAGAGAAAATAACACTAACACTATTACAGCCCATTGGGTGTTTGCCTACAATTTCTGTAGCAACTGGCTTCCAAAACTGCATTGACCTTCTGAACTTGGTATCCACAAATCACAACAAGTTGATTCTCCAAAATGTGGATGATCTGAATAAGGAACTTGGAAAATCAGTTTTCAAAACACTAGACCTCTACAACTCTTTCCTCTCCACCATTCAAACTATGCAAAAAAGTCATGCTGAAAACTCAACATTGATGAATCCACTGGAACCATGTTGTGCAAAAGACAGTGCTGGATTTAATTGTGGAAAGGTGGATGACAAAGGACAAAAACGTTATACTTTATGTGAGAAGCCAGAACTTTCATTCTTTTGGGATAATGTTCATCCTTCTCAGAATGGTTGGAATTCTGTCTACACGCAATTGGAATCTTCTCTAGGCCAACTTATCTAG 1029 0.3858 MVKQNQSTISFLLLLLLPLLLILAISTEVEGANKLFVFGDSYVDTGNFHNSGSYKPPSGMTYPGAPAGRFCDGRVLTDYIASFLKIDPPTPYSLKNSSNFQNGINFAYGGTGFFQTLVDGPNVSVQISSFEQQIQQNVYNKSDLETSLVLVNSGANDYTTFALKNMSFLEIEKFTESLVKEVVVNLRRIQSLGAEKITLTLLQPIGCLPTISVATGFQNCIDLLNLVSTNHNKLILQNVDDLNKELGKSVFKTLDLYNSFLSTIQTMQKSHAENSTLMNPLEPCCAKDSAGFNCGKVDDKGQKRYTLCEKPELSFFWDNVHPSQNGWNSVYTQLESSLGQLI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1540 342 Pfam GDSL-like Lipase/Acylhydrolase 35 326 IPR001087 GO:0016788
Lan11g1540 342 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 342 - -
Lan11g1540 342 Gene3D SGNH hydrolase 27 340 IPR036514 -
Lan11g1540 342 PANTHER OSJNBB0059K02.9 PROTEIN 1 342 - -
Lan11g1540 342 SUPERFAMILY SGNH hydrolase 34 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1540 Lan-Chr11 27886630 27890138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1540 35 334 Acyl Lipid Metabolism Gene Families AT4G10950 24.484 3.55e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1540 - - gmx:100790363 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1540 11 27886630 27890138 Lan20g1131 20 14867366 14873068 LSH
Lan9g0377 9 5611974 5618633 Lan11g1540 11 27886630 27890138 PCT
Lan5g0285 5 3987385 3992555 Lan11g1540 11 27886630 27890138 PCT