Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1535 ATGCAACACAAATTAAAAACCACATATCCACAAACACCAACATCAAATCCAATTCCTACTATGTTCTCCAATTCTCATCCCCTTTCCAACTCTTCACCCCTTTGTTCCCAATCTCCTCAACCTTTCTCTTCGCGGTCGCAATCTCCTCCCTCGGCTACTCCTCCACCACAATCTCCTCCTCCTCCACCAGTGGTGGTAAGCCCATGTGCAGCCTGCAAGATCCTTCGCCGCCGCTGCGTTGAGAGATGTGTCTTGGCTCCTTATTTCCCTCCCAACGATCCAATCAAGTTCACTATTGCTCATAGAGTATTTGGAGCTAGCAATATCATCAAGTTCTTGCAGGAACTACCAGAGTCTCAGAGAGAAGATGCTGTGAGCAGCATGGTCTATGAAGCAAATGCTAGGATTAGAGACCCAATATATGGTTGTGCAGGTGCAATATCCCAACTTCAAAATCAAATTAATGAGTTACAAGCACAATTAGCCAAAGCACAAGCTGAGATAATCAACATGCACTTCCAACATAGTAATTTAGTTGCACTAATCTGCATGGAAATGAGTGAGTCTCAAGAAAAGCAATTGTTTCAGTCTCAACAACACATTGATATGAGTTGCTTCTTAGATGACAATAGTTTGGGCTGTTCTTGGGAACCTCTTTGGACATGA 666 0.4354 MQHKLKTTYPQTPTSNPIPTMFSNSHPLSNSSPLCSQSPQPFSSRSQSPPSATPPPQSPPPPPVVVSPCAACKILRRRCVERCVLAPYFPPNDPIKFTIAHRVFGASNIIKFLQELPESQREDAVSSMVYEANARIRDPIYGCAGAISQLQNQINELQAQLAKAQAEIINMHFQHSNLVALICMEMSESQEKQLFQSQQHIDMSCFLDDNSLGCSWEPLWT* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1535 221 Coils Coil 147 174 - -
Lan11g1535 221 MobiDBLite consensus disorder prediction 48 63 - -
Lan11g1535 221 ProSiteProfiles LOB domain profile. 67 168 IPR004883 -
Lan11g1535 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 54 209 - -
Lan11g1535 221 MobiDBLite consensus disorder prediction 1 63 - -
Lan11g1535 221 MobiDBLite consensus disorder prediction 1 47 - -
Lan11g1535 221 Pfam Lateral organ boundaries (LOB) domain 68 165 IPR004883 -
Lan11g1535 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 54 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1535 Lan-Chr11 27795299 27797289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1535 64 221 AS2 family AT1G07900 69.136 8.44e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan11g1535 LOB 2.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1535 - - lang:109337699 290.426