Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan11g1529 | ATGGGAGTTTCTTCACACCCTTTACTTGTTTCCCCCTCTTTGAAAAATATACCTAAGGCAACTGAAGAAAACAAAAGTTCTTCATATGAATGGAACAAAGTGTTGGTAACACAAGACACAAAGCAGAAGGGTACCAAGAAAAGTGTCAAGGGTAGGAAGCAAGGAAAGATTTTAAGGAAGAAGAGGACACTCTTGGTGGAAGGTTCTAGAAGACAAGCCAAAGAGATTCAGAGAAGGGTTAGAACACTGAAGAGGCTTATACCTAATAACCAATACATGGGGTTGGATGGACTATACAGAGAAACATTTGATTACATATTGTCTTTGCAAATCAAAGTAAAAGCCATGCAACTTATGGTTCAGACATTGACAGGTTAA | 378 | 0.3836 | MGVSSHPLLVSPSLKNIPKATEENKSSSYEWNKVLVTQDTKQKGTKKSVKGRKQGKILRKKRTLLVEGSRRQAKEIQRRVRTLKRLIPNNQYMGLDGLYRETFDYILSLQIKVKAMQLMVQTLTG* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan11g1529 | 125 | Coils | Coil | 66 | 86 | - | - | |
| Lan11g1529 | 125 | CDD | bHLH_AtIBH1_like | 65 | 120 | IPR044549 | GO:0006355 | |
| Lan11g1529 | 125 | PANTHER | TRANSCRIPTION FACTOR UPBEAT1 | 19 | 124 | - | - | |
| Lan11g1529 | 125 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 19 | 124 | IPR044660 | GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan11g1529 | Lan-Chr11 | 27607004 | 27607463 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan11g1529 | 66 | 124 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G47270 | 61.667 | 1.13e-19 | 75.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan11g1529 | - | - | ccaj:109814433 | 113.62 |