Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1521 ATGTTGGCAATGGAGAAGGATTTTGAGTCAAAGTTGAAGATTCAAGGGAATTCCTCTAATGGTAGTGGTGGTGGGAGTGTGCAGAGATCTAAAAGTTTTGCTTTTAGAGCTCCTCAGGAGAATTACACCATTCAGGATTTTGAGTTGGGAAGGATCTATGGTGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGATTCAGGAATTGTGTATGCAATGAAGATCATGGACAAAAAGTTTATTACTAAAGAGAACAAAGCAGCTTATGTGAAGTTGGAACGTATAGTGCTTGACCAATTAGATCATCCTGGCATTGTTCGGCTATTTTTCACTTTTCAAGACACATTTTCTCTCTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAGATAACCAGGAAAGGTCGTCTATCCGAGGATGAAGCACGGTTTTATGCAGCTGAAGTTGTGGATGCTCTTGAATATATACATAGTTTGGGGTTGATCCATCGTGATATTAAGCCAGAGAACTTGTTACTTACTAGTGATGGTCATATAAAAATAGCCGATTTTGGGAGCGTGAAGCCTATGCAGGATAGCCAAATCACCGTCCTTCCAAATGCAGCCTCAGATGATAAAGCCTGCACGTTTGTCGGGACAGCTGCATATGTACCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGATCTCTGGGCACTTGGATGCACATTATACCAAATGCTTTCTGGAACCTCTCCTTTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATAATAGCCAGAGAAATTCGAATTCCAGATTACTTTTCTGAGGAGGCCAGAGACCTTATTGATCGGTTATTGGATTTGGAACCCAGCAGGAGACCAGGTGCAGGACCCGACGGTTATACTGCTTTGAAAATGCATCCCTTTTTCAATGGAGTTGATTGGGATAACTTAAGGGCACACACCCCTCCAAAACTTGTTCTGGATTCTGGGGGTCAATCACCTGAGGTTGATTATGTTCATGATTCATCATGGAATCCTTCTCACGTCGGGGATGGATCTGCTAGACAACCTGATGGTGTTGCGACATCTTCCGAGGGGACTGGTAGCATTACTAGGCTAGCTTCAATTGATTCTTTTGATTCAAAATGGCAACAATTTTTGGATCCCGGGGAATCCGTTCTTATGATCTCGATGGTAAAGAAATTACAGAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCAAAGTTGATCTATGTGGACCCATCAAAGCTAATCGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGACTTGAGTATCCAAGTAACAAGTCCTTCACATTTCAAGATTTGCACACCAAAAAAGGTAATGTCATTTGAGGATGCAAAGCAAAGAGCCTTGCTGTGGAAAAATGCAATTGAAGGTCTTCAAAACCAGTAG 1470 0.4136 MLAMEKDFESKLKIQGNSSNGSGGGSVQRSKSFAFRAPQENYTIQDFELGRIYGVGSYSKVVRAKKKDSGIVYAMKIMDKKFITKENKAAYVKLERIVLDQLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTSDGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRIPDYFSEEARDLIDRLLDLEPSRRPGAGPDGYTALKMHPFFNGVDWDNLRAHTPPKLVLDSGGQSPEVDYVHDSSWNPSHVGDGSARQPDGVATSSEGTGSITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSHFKICTPKKVMSFEDAKQRALLWKNAIEGLQNQ* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1521 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 485 - -
Lan11g1521 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lan11g1521 489 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Lan11g1521 489 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 21 485 - -
Lan11g1521 489 SUPERFAMILY Protein kinase-like (PK-like) 44 355 IPR011009 -
Lan11g1521 489 SUPERFAMILY PH domain-like 308 488 - -
Lan11g1521 489 Pfam Protein kinase domain 49 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1521 489 Gene3D Transferase(Phosphotransferase) domain 1 131 326 - -
Lan11g1521 489 MobiDBLite consensus disorder prediction 347 371 - -
Lan11g1521 489 Gene3D - 367 489 IPR011993 -
Lan11g1521 489 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1521 489 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1521 489 Pfam PH domain 386 488 IPR033931 -
Lan11g1521 489 Coils Coil 469 489 - -
Lan11g1521 489 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1521 Lan-Chr11 27378634 27385891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1521 1 489 AGC Kinase Gene Family AT3G10540 82.688 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Lan11g1521 Pkinase 3.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1521 K06276 - gmx:100788780 883.248