Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1518 ATGTATAGTACCAATAATACTATTACTCCTTCTGAATCTGGAAATTCGAAGTTGCAGATGACGATTGAAGATGAACAACATCAACAAGGAGAAGGAGGTTCGTTCAAAAGTTGGGCCAAGCAAACAGAAGAAAGCTATCAGCTTCAGCTTGCACTCGCTCTTCGTCTTTCTTCTCACTCTTCTTCTGCTAAAGATCCCAATTTTCTTGAATTCGATTCTGCTTCTAATTCATCATCAATTTCACCTCAGTCACTTTCTCACCGTTTTTGGGTAAATGGTTGTTTACAATACTCTGACAGAGTTATAGATGGGTTTTACCTAATCCATGGGATGGATGCATATACATGGACTATAAGTACTGATATGCAGAATGTTGGTACGATTCCATCATTTGAATCACTGATGTCAGTCGAACCTGGTGATGACTCATCAATTGTAGTGATTGCTTTTGATAAATCAAGAGATTCTGGTTTGAGAGAACTGCAAAGTCGGGTACTCAGTCTTTCAAGTAACTGGATTACTACAAAAGATGCAACTGATCAGCTTGCAAATATTGTTTATAGTAGGATGGGGGGAGGATCTTCAACTGAGGAAAATTTATGTACAGGCTGGAAGGAATGCATCCAAATTCTTAAAAGCTGCATGCATTCTGTCATTCTTCCAATTGGAAGCTTACCAGTTGGCCTGTGTGTTCATCGAGCATTGCTGTTTAAAGTATTAGCTGACTTAATCAACCTACCATGCCGCATTGCTAAGGGCTGCAAGTATTGTAGGAAGGACATAGGTGCTTCATGTATAGTGAAGTTTGGTTCTGACAGGGAGTATATTATTGATTTAGTTGGAATGCCCGGGACATTGAGCCAACCTGATTCTTCACTGAATTCTGCATCTTCAATGTTGATCTATTCACCATTATGTCATCCGAAGTTCAAGCCAGTTGAGACAGCTGAATATACGAAGACATTTGCCCAATTGTATTTTTTGGACAGTCAAGCACTGCATCTTGTATTTGATACTACATCAGGTGGTGCTGTGCATCATAGTGACAGAATGGATGTACAGCGAACAGAAGCTTTTAGTGCGAACTATGCTGTCCGAAACAACCATCTGACTGTTTTTAGTCCTACTACAGAGGCATATGTGTCTTTCAATGAAGCTAACCAGTCGGTAATGGATTATCCAAGTCATGAAGTTGACCTTGATGAGGAGGATCTGGATATTCGATGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGATCATTTGGAACTGTCCTTCGTGCTGATTGGCGTGGTTCGGATGTTGCTGTGAAGATTCTTAAGGTGCAAGGTTTTGATGCTGAACGATTTGAAGAATTTAAAAAGGAGGTCTCACTCATGAAGCGCCTACGGCATCCAAACATTGTTCTTTTAATGGGTGCAGTTATTCAACCCCCTAAGTTATCCATAGTAACAGAATATTTATCAAGAGGCAGCTTGTATGAACTTCTGCAGATTCAAGGTATTGGATCATCACTTAATGAGAAGTGCCGCTTAAGAATGGCTTATGATGTGGCAAGTGGAATGAATTATCTTCATCAAATGAGACCTCCCATTGTTCATAGAGATTTAAAGTCTCCAAACCTCTTGGTGGATGATACATACACCGTGAAGGTTTGTGACTTTGGCCTTTCACGTACAAAGGCAAATACTTATCTTTCATCTAAAACAGCAGCAGGGACTCCTGAATGGATGGCACCAGAAGTCATCCGAGGGGAACTGTCAAATGAAAAATGTGATGTATTCAGCTTTGGTGTGATCTTGTGGGAATTAGTAACCCTGCAACAACCTTGGAGACAATTTAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTTGAAATTCCAAGCCATGCAAATCCTCGAGTGGCTGCCTTGATTGAGCTCTGTTGGGATACTGAACCTTGGCGACGACCTTCTTTCTCCAATATTATGAAATGTTTGCAGAATATAATTGCTGATACTGAAGGGTGA 2028 0.4058 MYSTNNTITPSESGNSKLQMTIEDEQHQQGEGGSFKSWAKQTEESYQLQLALALRLSSHSSSAKDPNFLEFDSASNSSSISPQSLSHRFWVNGCLQYSDRVIDGFYLIHGMDAYTWTISTDMQNVGTIPSFESLMSVEPGDDSSIVVIAFDKSRDSGLRELQSRVLSLSSNWITTKDATDQLANIVYSRMGGGSSTEENLCTGWKECIQILKSCMHSVILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDIGASCIVKFGSDREYIIDLVGMPGTLSQPDSSLNSASSMLIYSPLCHPKFKPVETAEYTKTFAQLYFLDSQALHLVFDTTSGGAVHHSDRMDVQRTEAFSANYAVRNNHLTVFSPTTEAYVSFNEANQSVMDYPSHEVDLDEEDLDIRWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDAERFEEFKKEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLQIQGIGSSLNEKCRLRMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDTYTVKVCDFGLSRTKANTYLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRQFNPSQVVAAVGFMGKRLEIPSHANPRVAALIELCWDTEPWRRPSFSNIMKCLQNIIADTEG* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1518 675 Pfam Ethylene-responsive protein kinase Le-CTR1 83 286 - -
Lan11g1518 675 SMART serkin_6 412 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1518 675 PRINTS Tyrosine kinase catalytic domain signature 486 499 IPR001245 GO:0004672|GO:0006468
Lan11g1518 675 PRINTS Tyrosine kinase catalytic domain signature 527 545 IPR001245 GO:0004672|GO:0006468
Lan11g1518 675 PRINTS Tyrosine kinase catalytic domain signature 574 584 IPR001245 GO:0004672|GO:0006468
Lan11g1518 675 PRINTS Tyrosine kinase catalytic domain signature 593 615 IPR001245 GO:0004672|GO:0006468
Lan11g1518 675 PRINTS Tyrosine kinase catalytic domain signature 637 659 IPR001245 GO:0004672|GO:0006468
Lan11g1518 675 Gene3D Phosphorylase Kinase; domain 1 405 490 - -
Lan11g1518 675 ProSiteProfiles Protein kinase domain profile. 412 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1518 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Lan11g1518 675 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 387 673 - -
Lan11g1518 675 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 353 - -
Lan11g1518 675 Gene3D Transferase(Phosphotransferase) domain 1 491 674 - -
Lan11g1518 675 ProSitePatterns Protein kinases ATP-binding region signature. 418 439 IPR017441 GO:0005524
Lan11g1518 675 SUPERFAMILY Protein kinase-like (PK-like) 391 666 IPR011009 -
Lan11g1518 675 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 353 - -
Lan11g1518 675 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 387 673 - -
Lan11g1518 675 Pfam Protein tyrosine and serine/threonine kinase 413 666 IPR001245 GO:0004672|GO:0006468
Lan11g1518 675 CDD STKc_MAP3K-like 418 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1518 Lan-Chr11 27249817 27262587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1518 38 670 MAP Kinase Kinase Kinase AT5G03730 58.168 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan11g1518 PK_Tyr_Ser-Thr 3.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1518 K14510 - gmx:100807496 1083.55