Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1516 ATGGAGGATCTCCGGCAACTCATATCACCAAGTACCCATGTATGTTGCAAGCCAAATTTCCCAGAGCCACTGTTATCTACACATCACTGTACAAAGGCTGTTACTGCTTCTCAATCTAATAGCTACGACCCTACCATGGTTAGCCACAGTTTTTATTCTCCAGGGCTCACTCAGTTTTCTCATGACTATTCCTCTAGTACTATGATTCCAACAACAAACACCACTATTGCTGCTATTACTGGTTCAGATCATGACGCAACTGCATGCTTTAGCTTAAAGGAAACGGGATGGCTTGGATTTGATGCTGGAAACAAAAGGTGGCCTAGACAAGAGACTCTTTCCCTTATAGAGATCAGATCTCGTATGAATTCCAAGTTTAGAGAGACTAGTCATAAAGGACCCTTGTGGAATGATATTTCTAGGATAATGATGGAGGAATACGGGTACGAAAGAAGCGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACTTCCAAGGAAGGTAGACATGATGGAAAACGCTACAGATTCTTCAACCACCTTCAAGCAATATATGGAGAAATTCAAACAAACACACATGCTAGAAACATTCACATTGTTCATGAAACTCCAAGTTCCATTAACAACCAAACCAGTGATGTTTTCAGTAACCACAAAGGCTCAGATCAGAGACTAAGTTTGTCAAAGTCATCATCTGAATTTGAGACATCATCATCTGAAAACAACGAGGAGAGTATTTCAGAAATTGCATTAATAATGGAGAAGGAACATAAGAGACAAAGTAATGGAAGGGTAAGAAGAAAAAGTTTGAGAGTTATAGTTGAGGAGGTTGTGGAGTCTTGTATGAGGAAGATTATAGAGGCTCAAGATTCTTGGATGGAGAAGGTGTTGAGTGTTGTTGAACAAAGAGAGAAAGAAATGATGTATAAGGAGGACGAAAGAAAGAAAAAAGAGACAATGGTGTTTGATAAAAAAGTACATGAACTTAGGGCTAAAGAGAGAGCTTGGGTTGAAGCAAGAGATGCTGCATTGATGGAGGTTGTGAAGAAGCATAGTGGTAGAGAATTTGAAGCTGAACTTTTCATTGAAGAAGCTCAAGATTATAAAAACAAAAGAGAAGGAAATGATTCTAAGGAATATCCATGCCAAGGTTCTGATTATAGAAGAAAATGGACAGAAATGGAGATTTCAAATTTGATACAACTAAGGTTTGGTTTTGAGCATAGATTCCAAGAAAATGGTTACTTGGAGAATGGGCAATGGGATGATATAGCAGAAAAAATGGTGTGTTTGGGATATAATAAGAGTGCCACTGAGTGCATGCAAATATGGGATGAGATCAGCATCTCTCTCAGCAAGGCATGA 1383 0.3847 MEDLRQLISPSTHVCCKPNFPEPLLSTHHCTKAVTASQSNSYDPTMVSHSFYSPGLTQFSHDYSSSTMIPTTNTTIAAITGSDHDATACFSLKETGWLGFDAGNKRWPRQETLSLIEIRSRMNSKFRETSHKGPLWNDISRIMMEEYGYERSGKKCKEKFENLYKYYKKTSKEGRHDGKRYRFFNHLQAIYGEIQTNTHARNIHIVHETPSSINNQTSDVFSNHKGSDQRLSLSKSSSEFETSSSENNEESISEIALIMEKEHKRQSNGRVRRKSLRVIVEEVVESCMRKIIEAQDSWMEKVLSVVEQREKEMMYKEDERKKKETMVFDKKVHELRAKERAWVEARDAALMEVVKKHSGREFEAELFIEEAQDYKNKREGNDSKEYPCQGSDYRRKWTEMEISNLIQLRFGFEHRFQENGYLENGQWDDIAEKMVCLGYNKSATECMQIWDEISISLSKA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1516 460 Pfam Myb/SANT-like DNA-binding domain 105 190 IPR044822 -
Lan11g1516 460 Pfam Myb/SANT-like DNA-binding domain 394 453 IPR044822 -
Lan11g1516 460 ProSiteProfiles Myb-like domain profile. 106 164 IPR001005 -
Lan11g1516 460 SMART sant 103 166 IPR001005 -
Lan11g1516 460 SMART sant 393 456 IPR001005 -
Lan11g1516 460 CDD GT1 105 170 - -
Lan11g1516 460 PANTHER - 25 457 - -
Lan11g1516 460 Gene3D - 397 458 - -
Lan11g1516 460 Gene3D - 107 169 - -
Lan11g1516 460 ProSiteProfiles Myb-like domain profile. 394 454 IPR001005 -
Lan11g1516 460 MobiDBLite consensus disorder prediction 211 247 - -
Lan11g1516 460 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 25 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1516 Lan-Chr11 27211691 27214264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1516 106 459 Trihelix Transcription Factor Family AT5G03680 37.859 7.98e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan11g1516 Myb_DNA-bind_4 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1516 - - lang:109360148 895.19