Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1493 ATGGGGAACACTTGTGTTGGTCCAAGCATTCCAAAGAATGGTTTTCTTCAATCAGTTTCTGCAGCAATGTGGTGGTCCCAATCATCCGAAGGATCGGTATCGAATTCTAATAGAGGAACTGGAAATTTGGAAACAACTAAAGAGCCTGAATCACCCTTTCCTGTCCAAAGCAAACCCCCTGAGCAGATAACTATGCCAAAACCAGAAGCAAAACCAGTAGCAAAACATGAAACAGAACCGGAACGGGAAAAGGAGAAGAAGAAAGCCAAGAAACCTGGTCATATGAAGAGAGTTTCTAGCGCAGGACTTCGCGTTGATTCCGTGTTACAAACCGAGACTGGTAATTTCAAGGAGTTCTTCACTCTGGGGAGGAAACTTGGACAGGGTCAGTTTGGGACGACATTGTTGTGTATTGAGAAGGCAACAGGACGCGAGTATGCGTGCAAATCAATTGCGAAGAGGAAGCTGGTAAGTGATGAAGATGTTGAGGATGTGAGAAGAGAAATTCAGATAATGCACCATTTGGCGGGGCATCCTAATGTTATATCCATCAAAGGTGCTTATGAGGATTCAGTGGCAGTGCATGTTGTGATGGAGTTATGTGCTGGTGGTGAGCTTTTTGATCGGATAATTCAGCGTGGGCATTATACTGAAAGACAGGCAGCTGACCTCATTAGGACTATAGTTGACGTTGTCGAGGCTTGTCACTCTCTAGGTGTGATGCACAGAGACCTTAAACCGGAGAATTTTCTCTTTATCAATAAACAGGAGGATTCATCTCTCAAAACCATTGACTTTGGATTATCCGTGTTCTTTAAGCCAGGTGAAATATTTATGGATGTAGTTGGCAGTCCATATTATGTCGCCCCGGAAGTTTTGGGAAAGTGGTATGGTCCTGAAGCCGATGTTTGGAGTGCTGGGGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTTTGGGCTGAAAGCGAACAAGAAATATTTGAACAGGTTCTGCATGGCGATCTTGATTTCACTTCCGATCCCTGGCCTCAAATTTCTGAAAGTGCGAAAGATTTAGTAAAGAAAATGCTTGTTCGTGACCCTAGAAGGAGGCTGAAAGCACATCAAGTATTATGTCATCCATGGATTCAAGTTGATGGTGTGGCTGCTGACAAGCCACTTGATTCTGCTGTATTAAGTCGCTTGAAGCAATTTTCTGCAATGAACAAGCTCAAGAAAATGGCTCTCATAGTCATTGCGGAGAGCTTATCCGAAGAAGAAATAGCTGGCTTGAAAGAAATGTTCAAGATGATCGATACAGACAACAGTGGTCAAATCACTTTTGATGAACTTAAAGCTGGTTTGAAAAGAGTGGGTGCTAATGTTAAGGAGTCTGAAATTTATGATTTAATGCAAGCGGCTGATATAGATAACAGTGGAACAATTGATTACTGCGAGTTTATTGCTGCAACATTGCATCTGAACAAGATCGAAAGGGAAGATCATCTATTTGCAGCCTTTTCTTACTTTGATAAAGATGGAAGCGGCTATATTACTCCAGATGAACTTCAACAGGCTTGTGACGAGTTTGGCATAGGAGATATCCGCTTGGAGGAGATAATGGGAGAAATCGATGAAGACAATGATGGCAGAATAGATTATAATGAGTTTGTGGCCATGATGCAGAAGGGAAATGCTCCTATGGTTGGTAGGAAAGGCCTAGAACATAGCTTCAGCATTGGTTTCAGGGAAGCATTCAAACAGTAG 1752 0.4252 MGNTCVGPSIPKNGFLQSVSAAMWWSQSSEGSVSNSNRGTGNLETTKEPESPFPVQSKPPEQITMPKPEAKPVAKHETEPEREKEKKKAKKPGHMKRVSSAGLRVDSVLQTETGNFKEFFTLGRKLGQGQFGTTLLCIEKATGREYACKSIAKRKLVSDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDSVAVHVVMELCAGGELFDRIIQRGHYTERQAADLIRTIVDVVEACHSLGVMHRDLKPENFLFINKQEDSSLKTIDFGLSVFFKPGEIFMDVVGSPYYVAPEVLGKWYGPEADVWSAGVILYILLSGVPPFWAESEQEIFEQVLHGDLDFTSDPWPQISESAKDLVKKMLVRDPRRRLKAHQVLCHPWIQVDGVAADKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSEEEIAGLKEMFKMIDTDNSGQITFDELKAGLKRVGANVKESEIYDLMQAADIDNSGTIDYCEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITPDELQQACDEFGIGDIRLEEIMGEIDEDNDGRIDYNEFVAMMQKGNAPMVGRKGLEHSFSIGFREAFKQ* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1493 583 MobiDBLite consensus disorder prediction 25 52 - -
Lan11g1493 583 ProSiteProfiles Protein kinase domain profile. 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1493 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 567 - -
Lan11g1493 583 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Lan11g1493 583 ProSitePatterns EF-hand calcium-binding domain. 506 518 IPR018247 -
Lan11g1493 583 ProSiteProfiles EF-hand calcium-binding domain profile. 493 528 IPR002048 GO:0005509
Lan11g1493 583 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Lan11g1493 583 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 64 567 - -
Lan11g1493 583 Gene3D Transferase(Phosphotransferase) domain 1 206 402 - -
Lan11g1493 583 SUPERFAMILY EF-hand 418 558 IPR011992 -
Lan11g1493 583 SMART serkin_6 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1493 583 CDD EFh 497 557 IPR002048 GO:0005509
Lan11g1493 583 ProSitePatterns Protein kinases ATP-binding region signature. 126 153 IPR017441 GO:0005524
Lan11g1493 583 SUPERFAMILY Protein kinase-like (PK-like) 119 379 IPR011009 -
Lan11g1493 583 CDD STKc_CAMK 119 377 - -
Lan11g1493 583 Gene3D - 403 562 - -
Lan11g1493 583 MobiDBLite consensus disorder prediction 70 88 - -
Lan11g1493 583 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Lan11g1493 583 SMART efh_1 425 453 IPR002048 GO:0005509
Lan11g1493 583 SMART efh_1 461 489 IPR002048 GO:0005509
Lan11g1493 583 SMART efh_1 531 559 IPR002048 GO:0005509
Lan11g1493 583 SMART efh_1 497 525 IPR002048 GO:0005509
Lan11g1493 583 Pfam EF-hand domain pair 496 557 IPR002048 GO:0005509
Lan11g1493 583 Pfam EF-hand domain pair 426 486 IPR002048 GO:0005509
Lan11g1493 583 MobiDBLite consensus disorder prediction 25 99 - -
Lan11g1493 583 Pfam Protein kinase domain 121 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1493 583 Gene3D Phosphorylase Kinase; domain 1 122 205 - -
Lan11g1493 583 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Lan11g1493 583 ProSiteProfiles EF-hand calcium-binding domain profile. 531 562 IPR002048 GO:0005509
Lan11g1493 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Lan11g1493 583 ProSitePatterns EF-hand calcium-binding domain. 540 552 IPR018247 -
Lan11g1493 583 CDD EFh 426 485 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1493 Lan-Chr11 26284133 26290821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1493 1 578 EF-hand Containing Proteins AT5G04870 74.715 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan11g1493 Pkinase 1.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1493 K13412 - gmx:100819792 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0340 19 4145857 4150471 Lan11g1493 11 26284133 26290821 PCT