Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1486 ATGGAAATGGACATTGACGAAGCTTCTGGAACCAAAGAGGGAAATCCTGTTTTGGTCATCTTAGTTGGAGCACCAGGGAGCGGGAAGTCCACCTTCTGTGAAGAAGTTATGCGATCCTCTACTCGTCCTTGGGTTCGCGTTTGTCAGGACACCATTGGAAATGGTAAAGCAGGAACTAAAGCTCAGTGCCTGAGCAGTGCAGATAGAGCGTTGAAGGGTGGGAAGAGTGTATTTATTGACAGGTGCAATCTTGAAAAAGTGCAGCGCTCAGAATTTATAAAGCTTGGGAGTGGACCCCAAATCGATGTGCATGCAATTGTACTTGATCTTCCTGCAAAGCTTTGTATTTCACGATCAGTCAAACGAAGTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTAAATAGAATGCTTCAAAAGAAAGAGCTACCCAAACTAATTGAAGGCTTTAATCGGATAACATTTTGCCAGAGTGAGAGTGATGTCAAAGATGCCCTTAATACATACAGTGCACTTGGACCACTGCATAACCTTCCAAATGGTTGCTTTGGCCAGAAGAGTCCAGATGCCAAAATTCAAGTTGGTATAATGAGGTTCCTAAAAAAGTCAGAAGTCCCAGTTGAAACTGCATCTACGGATAATGGTATTAAAGAGTCTACATCCCAGACACATGGGAATGTTGATCCCCGCTGCAAAGATACAGAAAAAGTTTCATCAATTCCAGATAATGCCTACTTGGAGTCAAAGGAAGCACAAGGCCGAGCAGTTGGCTCTGCTAGTTCCGATGCCAATCAAGATGCCCCCACTTTGGCATTTCCATCTATTTCAACATCTGATTTTCAATTCAACCATGAGAGGGCAGCTGATATTATTGTTGACAAGGTTGCCGAGTTCTCAAATAAGATTGGAAATGCCAGACTTGTTTTAGTTGATTTGACACATAAATCAAAGATTCTGTCCTTAGTTAAAGCCAAAGCAGCAGAAAAAAACGTTAACACCCAAAAATTCTTTACGCATGTTGGGGACATTACTCGCCTTTATTCCACAGGAGGTTTGCGCTGTAATGTCATAGCTAATGCTGCCAACTGGCGGTTAAAACCTGGAGGTGGAGGCGTTAATGCAGCAATTTTTAATGCAGCTGGTTCTGAACTCGAGAATGCAACCAAAGAAAAAGCAAAATCTCTTTCACCTGGGAATGCTATTGTTGTCCCTCTACCTTCGTCTTCCCCTTTGTTCACTAGAGAGGGTGTAACACATGTAATACATGTTCTTGGACCAAATATGAACCCACAAAGACCAAATTGTCTCAACAATGATTATAATAAAGGCTGCAACATTCTCCAAGAGGCTTATGCTGCACTTTTTGAAGGTTTTGTGTCAATTTTGGGGACCCAGGTAGAGCAAACTAATGTAAGAAATGAAAACCTTGGAAATCAGTCCTTGGCATTGCAGAATAAGTCTGAATGTTGCTATAAAAATAATTTCACAAATACTGATCAAAAGAGCAAGAGAGATGCTGATCACGGATCTGAAAAAAGCAAGAAATACAAGGAAACTCGGGATGACTTTGGATCAACCATTACAGATTCTAGGGATGAAAAGGTGGACTCAGAGCATAGAAGAACTGATGGGTCCATGAATAAGGCATGGAGTTCGTGGGCTCAAGCACTTCACCAAATAGCTATTCATCCTGAAAAGCATAAGGATGACTTGCTTGAAATATCTGAAGATATTGTTGTATTGAATGATGCGTATCCCAAGGCAAAGAAGCATGTTCTGGTATTGGCACGAACTAGAGGTCTTGACTGCTTGGCAGATGCCCAAAATGAACACCTTCAATTATTGAAGAATATGCATGATGTGGGTTTGAAGTGGGTGGAGAAGTTCTTGCATGAGAATGCTTCACTGGTATTCCGTCTTGGATACCACTCGGTTCCATCAATGCGACAACTACATTTACATGTTATTAGCCAAGACTTCGAATCAAAACATTTGAAGAATAAGAAGCACTGGAACTCGTTCAACACTGCTTTCTTCCGTGACTCGGTTGATGTAATGGATGAGATCTCTAGTCATGGAAAAGCAACATTGAAAGATGATGATAAGTTACTATCTATGGAATTGAGGTGCCACAGATGTAGAAGTGCACATCCAAACATACCAAGGTTAAAATCACATATTAGCAGTTGCAAAGCCACCTTTCCTGCTCACTTACTTCAAAATGAACGCTTGGTGAATGCATCAAGTGAACCCAAGAACAATGACTAG 2280 0.4149 MEMDIDEASGTKEGNPVLVILVGAPGSGKSTFCEEVMRSSTRPWVRVCQDTIGNGKAGTKAQCLSSADRALKGGKSVFIDRCNLEKVQRSEFIKLGSGPQIDVHAIVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQKKELPKLIEGFNRITFCQSESDVKDALNTYSALGPLHNLPNGCFGQKSPDAKIQVGIMRFLKKSEVPVETASTDNGIKESTSQTHGNVDPRCKDTEKVSSIPDNAYLESKEAQGRAVGSASSDANQDAPTLAFPSISTSDFQFNHERAADIIVDKVAEFSNKIGNARLVLVDLTHKSKILSLVKAKAAEKNVNTQKFFTHVGDITRLYSTGGLRCNVIANAANWRLKPGGGGVNAAIFNAAGSELENATKEKAKSLSPGNAIVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNCLNNDYNKGCNILQEAYAALFEGFVSILGTQVEQTNVRNENLGNQSLALQNKSECCYKNNFTNTDQKSKRDADHGSEKSKKYKETRDDFGSTITDSRDEKVDSEHRRTDGSMNKAWSSWAQALHQIAIHPEKHKDDLLEISEDIVVLNDAYPKAKKHVLVLARTRGLDCLADAQNEHLQLLKNMHDVGLKWVEKFLHENASLVFRLGYHSVPSMRQLHLHVISQDFESKHLKNKKHWNSFNTAFFRDSVDVMDEISSHGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCKATFPAHLLQNERLVNASSEPKNND* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1486 759 SUPERFAMILY HIT-like 552 718 IPR036265 -
Lan11g1486 759 Pfam AAA domain 18 144 - -
Lan11g1486 759 ProSiteProfiles Macro domain profile. 327 503 IPR002589 -
Lan11g1486 759 PANTHER APRATAXIN 16 753 IPR026963 GO:0003677|GO:0006281|GO:0033699
Lan11g1486 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 125 IPR027417 -
Lan11g1486 759 MobiDBLite consensus disorder prediction 502 548 - -
Lan11g1486 759 MobiDBLite consensus disorder prediction 499 548 - -
Lan11g1486 759 Pfam C2HE / C2H2 / C2HC zinc-binding finger 679 732 IPR032566 -
Lan11g1486 759 Gene3D Leucine Aminopeptidase, subunit E, domain 1 231 318 IPR043472 -
Lan11g1486 759 Gene3D - 4 175 IPR027417 -
Lan11g1486 759 MobiDBLite consensus disorder prediction 214 237 - -
Lan11g1486 759 Pfam Scavenger mRNA decapping enzyme C-term binding 562 674 - -
Lan11g1486 759 ProSitePatterns HIT domain signature. 643 661 IPR019808 -
Lan11g1486 759 Gene3D Leucine Aminopeptidase, subunit E, domain 1 319 470 IPR043472 -
Lan11g1486 759 SMART YBR022w_8 339 579 IPR002589 -
Lan11g1486 759 PANTHER APRATAXIN-RELATED 16 753 - -
Lan11g1486 759 Pfam Macro domain 362 438 IPR002589 -
Lan11g1486 759 SUPERFAMILY Macro domain-like 269 312 IPR043472 -
Lan11g1486 759 Gene3D - 556 738 IPR036265 -
Lan11g1486 759 SUPERFAMILY Macro domain-like 320 459 IPR043472 -
Lan11g1486 759 MobiDBLite consensus disorder prediction 214 231 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1486 1 749 C2H2 Transcription Factor Family AT5G01310 56.974 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1486 K10863 - gmx:100786762 1203.73