Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1448 ATGATTGCATTTATGGAATCAAAGGAACAGACAAAAGAGATGGAGAAGTGTTTGGATCCTCAGCTATGGCATGCCTGTGCAGGTGGAATGGTGCAGATGCCACAGGTGAACAGCATGGTCTATTACTTCCCTCAGGGTCATGCTGAACATGCATGTGGTCCAGTGAATTTCATGACTTGTCCCAAGGTTCAACCTTTGGTACTTTGCAGGGTTGAAGCTATCAAATACATGGCTGATCCTGAAACTGATGAGGTATATGCCAAACTTAGGCTCATTCCTGTAAATCGGAATGATGCGGATTATGCCCGTGACAGTGCTGGAGACATCAATGGGTCTGAGAGTCAAGATAAGCCTGCTTCATTTGCAAAGACCTTAACTCAATCCGATGCCAACAATGGTGGAGGGTTTTCCGTTCCTAGATATTGTGCCGAGACGATTTTCCCTCGTCTAGACTATTCGGCTGAACCTCCGGTTCAAAACATCCTCGCCAAAGATGTTCACGGTGAAACATGGAAATTCAGGCATATTTATAGGGGCACGCCGAGGCGGCATCTATTGACTACTGGGTGGAGTACTTTTGTCAATCACAAGAAGCTTGTTGCCGGGGACTCAATTGTGTTTTTAAGAGCAGAAAATGGGGACCTATGTGTTGGAATTCGGAGAGCGAAGAAGGGCCTTATTGGTGGACCTGAGGCATCATCAGGGTGGAACCCTGCAGGTGGGAATTCTTCTGTGCCTTATGGTGGACTTGCAGCATATTTGAGAGGGGATGATGTCAATAGTCTTCTGAGAAATGGTAACAACAGCAACGGGTTGAATTTGAACCCGCCGAATTCGAGTATGATGGGGAAGGGAAAAGTGAGACCAGAAGCAGTTATTGAAGCTGTTACTCTTGCTGCAAATAAGCAACCTTTTGAGGTTGTTTACTACCCTCGGGCTAGTACTCCGGAGTATTGTGTGAAGGCCTCTTTAATAGAAGCAGCATTGCATAATAGGTGGTGTTCTGGAATGAGGTTCAAGATGCCCTTTGAAACTGAGGACTCATCACGGATAAGTTGGTTTATGGGAACCATATCTTCAGTCCAGGTTGCCGATCCCCTTGGCTGGCCTACTTCACCTTGGAGGCTTCTCCAGGTTATGTGGGATGAACCAGATTTACTTCAAAATGTGAGAAGGGTGAGCCCATGGCTAGTTGAATTGGTATCTAACATGCCTGCTATCCATCTTTCTCCTTTCTCACCTCCGCGGAAGAAATTGAGATTTCCCCAACACTCAGATTTCCCCCTTGATGGCCAGATTCCAATGCCAACATTCCCGAATAACCTTCTAGTTCCCAACAACAAGAACTTATTCAGTTATCCACCCGAAAGTTCTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCTTTATGGTTTATCCTTACCGAGCCTCCACCTCAATAGACTGCAGTCAGGTCTAATTCCTTCCGGTTTCCCACCTCCTGATCATGCTGCTACACCAACACGAATCACGACTAACATGTTATTTCAAAAGCCCAGCATGAGTGAGGATGTCTCTTGTTTATTATCTATGGCAAATTCTACTCAATCTACAAAGAAACCTGATGGTTTAAAGACACCACCCCAGCTTGTACTGTTTGGCCAAAAAATTCTCACCGAACAGCAGATCTCTATGAGCAGCTCGGGGGACACAGTATCCCCAGATGGAAATGCTGATAAATTGACCAAATTTTCTGATGGTAATGGATCAACTCGTCATCACCACGGCCTACCGGAATGCTCCTTTTGTGAAAGGTTCCCCTGGTATAAGGATAACTACCAAGAAACTGAGGCCAATTTGGAGATTGGTCACTGTAAAGTTTTTATGGAATCGGAAGATGTAGGTCGGACCATGGACCTCTCATTGCTACGGTCTTACGATGAACTTTACAGAAAGCTGACAGACATGTTTGCCATTGAAAAGTTCGAGATGCTTAGTCATGTGCTCTACCGTGATATAACCGGGGCAGTCAAACACATTGGCGATGAACCATTCAGTGACTTCACAAAAACAGCTAGGAGGTTGACTATATTAATGGATTCCAGCAGTGACAATGTAGGAGTGTAG 2106 0.4558 MIAFMESKEQTKEMEKCLDPQLWHACAGGMVQMPQVNSMVYYFPQGHAEHACGPVNFMTCPKVQPLVLCRVEAIKYMADPETDEVYAKLRLIPVNRNDADYARDSAGDINGSESQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGLIGGPEASSGWNPAGGNSSVPYGGLAAYLRGDDVNSLLRNGNNSNGLNLNPPNSSMMGKGKVRPEAVIEAVTLAANKQPFEVVYYPRASTPEYCVKASLIEAALHNRWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPLGWPTSPWRLLQVMWDEPDLLQNVRRVSPWLVELVSNMPAIHLSPFSPPRKKLRFPQHSDFPLDGQIPMPTFPNNLLVPNNKNLFSYPPESSPAGMQGARHALYGLSLPSLHLNRLQSGLIPSGFPPPDHAATPTRITTNMLFQKPSMSEDVSCLLSMANSTQSTKKPDGLKTPPQLVLFGQKILTEQQISMSSSGDTVSPDGNADKLTKFSDGNGSTRHHHGLPECSFCERFPWYKDNYQETEANLEIGHCKVFMESEDVGRTMDLSLLRSYDELYRKLTDMFAIEKFEMLSHVLYRDITGAVKHIGDEPFSDFTKTARRLTILMDSSSDNVGV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1448 701 Gene3D - 332 406 - -
Lan11g1448 701 Gene3D - 613 699 - -
Lan11g1448 701 ProSiteProfiles PB1 domain profile. 615 698 IPR000270 GO:0005515
Lan11g1448 701 Gene3D - 119 223 IPR015300 -
Lan11g1448 701 SUPERFAMILY DNA-binding pseudobarrel domain 114 221 IPR015300 -
Lan11g1448 701 CDD B3_DNA 120 221 IPR003340 GO:0003677
Lan11g1448 701 PANTHER AUXIN RESPONSE FACTOR 6 692 - -
Lan11g1448 701 MobiDBLite consensus disorder prediction 558 587 - -
Lan11g1448 701 Pfam B3 DNA binding domain 121 222 IPR003340 GO:0003677
Lan11g1448 701 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 692 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan11g1448 701 Pfam Auxin response factor 295 378 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan11g1448 701 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Lan11g1448 701 SMART B3_2 121 223 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1448 Lan-Chr11 23832502 23836468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1448 15 701 B3 DNA Binding Superfamily AT4G30080 58.405 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan11g1448 B3 3.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1448 - - gmx:100796522 1105.51