Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1441 ATGGCAGTTATAGGGAGGCGCAATGGCCTGAACGAGGAGGAAGAAGAGGACAACGCCCTTTTCGAAGAAAACGGCATCATTGACTTGGTCGACTCCGATACTCCTCCTCATCTCCGTGACCTATCCGCCGCCGCTCAGCTCGGCGACGTCGTTGCCCTCCGCCTCGCTTTAGATAACTTGACTGGTAGTATTGATGAGCCGGTTGAGGATGGGGATACAGCTCTTCATTTGACATGTTTATATGGTCACTTGGAATGTGTCCAGCTACTCCTAGAAAGAGGAGCAAACTTAGAGGCTAAGGATGACGATGGTGCAATACCTTTACATGATGCTTGTGCAGGAGGATTTACGGAGATAGTCCAAGTCCTACTTAACAGAGCTAATGATGTGGAGCATATAAAAAGGATGCTCGAAACAGTTGATTCTGAGGGTGATACACCTCTGCATCATGCAGCAAGAGGTGAGCATGTGGATGTAATTAGGTTGTTGCTGTCTAACGGTGCATCTCTCACAAAGACAAACTTATATGGAAAGACCCCAGCAGAGCTACCTGATCACGGCACAGATGCTAGGAGGTTGCTGGAATCTTCTGATACTGATATGGCATGCTAA 612 0.4788 MAVIGRRNGLNEEEEEDNALFEENGIIDLVDSDTPPHLRDLSAAAQLGDVVALRLALDNLTGSIDEPVEDGDTALHLTCLYGHLECVQLLLERGANLEAKDDDGAIPLHDACAGGFTEIVQVLLNRANDVEHIKRMLETVDSEGDTPLHHAARGEHVDVIRLLLSNGASLTKTNLYGKTPAELPDHGTDARRLLESSDTDMAC* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1441 203 ProSiteProfiles Ankyrin repeat profile. 103 135 IPR002110 GO:0005515
Lan11g1441 203 PRINTS Ankyrin repeat signature 71 86 IPR002110 GO:0005515
Lan11g1441 203 PRINTS Ankyrin repeat signature 159 173 IPR002110 GO:0005515
Lan11g1441 203 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 196 - -
Lan11g1441 203 Gene3D - 35 202 IPR036770 -
Lan11g1441 203 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Lan11g1441 203 PANTHER TANKYRASE-LIKE 1 196 - -
Lan11g1441 203 ProSiteProfiles Ankyrin repeat profile. 143 175 IPR002110 GO:0005515
Lan11g1441 203 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Lan11g1441 203 Pfam Ankyrin repeat 144 174 IPR002110 GO:0005515
Lan11g1441 203 ProSiteProfiles Ankyrin repeat region circular profile. 103 131 - -
Lan11g1441 203 ProSiteProfiles Ankyrin repeat region circular profile. 143 174 - -
Lan11g1441 203 Pfam Ankyrin repeats (3 copies) 43 127 IPR002110 GO:0005515
Lan11g1441 203 SUPERFAMILY Ankyrin repeat 41 182 IPR036770 -
Lan11g1441 203 SMART ANK_2a 70 99 IPR002110 GO:0005515
Lan11g1441 203 SMART ANK_2a 103 132 IPR002110 GO:0005515
Lan11g1441 203 SMART ANK_2a 143 172 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1441 41 186 Ion Channels AT2G25600 31.765 1.06e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1441 - - gmx:100527544 314.309