Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1439 ATGCAAGGCGAATATTTGCGTAAAGGGCCTTGGTTTCAAGAGGAAGATGAGACTTTGACTAGATTTGTGAACCATCTTGGTGGACGAAGGTGGGATTCCCTTGCCAAAGTAGCTGGTCTTAGGAGAAGTGGCAAAAGCTGCAGATTAAGGTGGAAGAACTATCTGCGTCCAAATCTCAAGCATGGCCCTTTTAGTGATGAAGAAAAACAGCTTATTATTCAGCTTCAGCAACTATGGGGTAACAAGTGGTCAAGGATTGCATGCAGACTTCCAGGAAGAACAGACAATGAAATAAAAAATTATTGGAGAAATCATTTAACAAAGAAGACTAAAGTTCAACAAGGTGACAATCACAAATTAGAGAACTCTACACAAGATTTCAGTCAGAAAAGTATTGATGATATGGTTTCCAAGGATTACAATCATGAAAACCTTAAATGTCAAGAACATAAGTGGGAGAGTAATGATAGCACCATAGACACATATCCCTTATCAGATTGGGGTTATGGAAGCTCACCATATGAAGTTAGGATATTAGATTGGACGGCAGAATTGCAAAATGGATATGGTGAGAAAGAACTAGTAAAGGACAGTAATATCACAGGAATCAATGATTATAATTCTCAAGGGTTTTCATCGGGATTTGATTCTTGGGATTATACAGTTTCTTCACTATGGGACATGAATTAA 690 0.3797 MQGEYLRKGPWFQEEDETLTRFVNHLGGRRWDSLAKVAGLRRSGKSCRLRWKNYLRPNLKHGPFSDEEKQLIIQLQQLWGNKWSRIACRLPGRTDNEIKNYWRNHLTKKTKVQQGDNHKLENSTQDFSQKSIDDMVSKDYNHENLKCQEHKWESNDSTIDTYPLSDWGYGSSPYEVRILDWTAELQNGYGEKELVKDSNITGINDYNSQGFSSGFDSWDYTVSSLWDMN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1439 229 PANTHER MYB TRANSCRIPTION FACTOR 3 229 - -
Lan11g1439 229 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Lan11g1439 229 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Lan11g1439 229 Gene3D - 8 60 - -
Lan11g1439 229 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Lan11g1439 229 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lan11g1439 229 SUPERFAMILY Homeodomain-like 7 102 IPR009057 -
Lan11g1439 229 Gene3D - 62 156 - -
Lan11g1439 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Lan11g1439 229 CDD SANT 63 106 IPR001005 -
Lan11g1439 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lan11g1439 229 CDD SANT 10 55 IPR001005 -
Lan11g1439 229 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 229 - -
Lan11g1439 229 SMART sant 7 57 IPR001005 -
Lan11g1439 229 SMART sant 60 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1439 Lan-Chr11 23566939 23568955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1439 1 111 MYB Transcription Factor Family AT5G59780 59.459 4.94e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan11g1439 Myb_DNA-binding 4.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1439 K09422 - gmx:100783472 310.842