Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1430 ATGACTGAAGCTTCTCCTTCAACTTCAAGCAAGATATACAAGCCAAGAGATGAAGAACTCATCAAAGATTTCCTTTACAACAAGGTCCATGGCCATGCAGAATCTATGCCTAACAATCTCACAGTTCTTGAATATGATTTGCATGGAGATAGGAACCCATGGGAGATTTGGGAAGCTTTTGAAGGGTCTAGTTATGATGGAAGGGAACTTTATATCTTCACCACTTTGAAGAAGAAATCACTCAATGGGTCACGTTTTCTTCGCATCATTGGGTGTGGTTCTTGGGAAGCTGAAGACACTGGAAAGAAGGTTGTAGCAGAAGGGATAAATCAATGTATTGGGTTGAAGAAACGTTTTAGGTTTGAGAAGAGTGGCACTGAACATGATGGTACGCGGTTGGATTCTGCATGA 411 0.4136 MTEASPSTSSKIYKPRDEELIKDFLYNKVHGHAESMPNNLTVLEYDLHGDRNPWEIWEAFEGSSYDGRELYIFTTLKKKSLNGSRFLRIIGCGSWEAEDTGKKVVAEGINQCIGLKKRFRFEKSGTEHDGTRLDSA* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1430 136 ProSiteProfiles NAC domain profile. 7 136 IPR003441 GO:0003677|GO:0006355
Lan11g1430 136 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 14 128 - -
Lan11g1430 136 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 128 - -
Lan11g1430 136 Pfam No apical meristem (NAM) protein 13 125 IPR003441 GO:0003677|GO:0006355
Lan11g1430 136 Gene3D NAC domain 16 134 IPR036093 GO:0003677|GO:0006355
Lan11g1430 136 SUPERFAMILY NAC domain 13 129 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1430 Lan-Chr11 23275172 23275582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1430 13 134 NAC Transcription Factor Family AT5G13180 34.426 5.62e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan11g1430 NAM 1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1430 - - lang:109359846 284.648