Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1426 ATGAAGTGCTTTGCATTCTACAATCGGGGTAAGAAGGATGATCGGAGGATCTTGCAATCAATGTCAGGTCGGTCTGAAATGAATTCTCAGAATATATCAGACACTAGTTCAGACTCCCTCAGGAGGAATGCATTTCCTAGTTTCTCCCAAAGGCCAAGCAACCTGAAAGTATTTACTGTACCGGAACTGAAATCAGCTACAAAGAATTTCAGCCGCTCAGTTATGCTTGGAGAGGGCGGGTTTGGGTGTGTCTACAAGGGATTGATTAATAGTGTCGATGAACCTTCCAGAAAAATTGAAGTTGCGGTTAAACAACTTGGTAAAAGTGGAACTCAGGGTCATAAGGAATGGGTGACTGAAGTGAATGTTCTGGGAATCGTTGAACATCCCAATCTTGTGAAACTAGTGGGATACTGCGCTGATGATGATGAAAGAGGAACCCAGCGGCTTCTGGTTTATGAATATATGTCCAACAGAAGCGTAGAACACCATTTATCCCCGCGAACAGAGACTCATCTGTCATGGAGTAAGAGATTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTTAGAGATTTCAAATCTTCAAATATCCTTTTGGATGAGCACTGGAATGCTAAGTTGTCGGACTTCGGATTAGCAAGATTGGGACCAGCAGATGGGTTATCTCATGTCTCAACAGAGGTTGTAGGAACAATGGGGTATGCAGCTCCTGATTATTTTCAAACTGGGCGTCTCACGTCAAAGAGTGACGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATTACTGGCAGGCGACCTATAGACCGAAACCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGATAAGGCCTTACCTTTCAGATGGGAAAAAATTTCAATTAATATTGGATCCAAGACTTGAGCGGAAACATATCTCGAAGTCAGCCCAGAGACTTGCTGTAATAGCTAACCGATGCTTGGTCAGAAACCCAAAGAGTCGGCCAAAGATGAGTGAGGTATTAGAAATGGTGAATCAGATTGTGGAGTCTTCAGTGAGTGCTAGTCCTCAGCCACCCTTTACATCAGTTGAAACTTCCCAGAACATTGAAATAAAGAACAAGAAAAAGAAAAAGGTCATTCATCCAAAGACAGTTGGTTGTAATTGGTTTAGGACATTGAGACCAAAGCTTTTAAGAGCAAGTTGA 1227 0.4279 MKCFAFYNRGKKDDRRILQSMSGRSEMNSQNISDTSSDSLRRNAFPSFSQRPSNLKVFTVPELKSATKNFSRSVMLGEGGFGCVYKGLINSVDEPSRKIEVAVKQLGKSGTQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGTQRLLVYEYMSNRSVEHHLSPRTETHLSWSKRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPADGLSHVSTEVVGTMGYAAPDYFQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKLLEWIRPYLSDGKKFQLILDPRLERKHISKSAQRLAVIANRCLVRNPKSRPKMSEVLEMVNQIVESSVSASPQPPFTSVETSQNIEIKNKKKKKVIHPKTVGCNWFRTLRPKLLRAS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1426 408 PANTHER OS01G0588500 PROTEIN-RELATED 24 402 - -
Lan11g1426 408 Gene3D Transferase(Phosphotransferase) domain 1 156 371 - -
Lan11g1426 408 Pfam Protein tyrosine and serine/threonine kinase 75 349 IPR001245 GO:0004672|GO:0006468
Lan11g1426 408 SUPERFAMILY Protein kinase-like (PK-like) 47 351 IPR011009 -
Lan11g1426 408 MobiDBLite consensus disorder prediction 21 47 - -
Lan11g1426 408 ProSiteProfiles Protein kinase domain profile. 70 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1426 408 ProSitePatterns Protein kinases ATP-binding region signature. 76 104 IPR017441 GO:0005524
Lan11g1426 408 PANTHER KINASE 1B 24 402 - -
Lan11g1426 408 Gene3D Phosphorylase Kinase; domain 1 43 155 - -
Lan11g1426 408 CDD STKc_IRAK 76 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1426 Lan-Chr11 23160662 23165240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1426 56 387 Glycoside Hydrolase AT3G07070 45.133 3.88e-93 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan11g1426 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1426 - - gmx:100305438 643.269