LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan11g1424	ATGGATCGGAAAGAATATTTGCGGGGGCATTCCAATATGAAATGCCAACGGGTGGATGAATCATATGTACCTGTTCTTAAAGATGATGAAATGGAAGATGAGCATTTACTTGAAGAACATAGAAATGGTCATATTTCAATGGATGGCAGTTTGGATTCTCATACAACTTTGAATGGCATGGATGATTTGGGACTGGAGGTGCTTGATGGAATCCTGGATGATGTTGAAATCAATGATCTTGATGGAATCGATGTTTTCTCTGGTGCATGTGACGAGTATTTTTTGGATTGTGACTTTGTCAACGATCCTGAGGTACTAGGCTATGGTCTTTCTAAAGGTTCACTTTTACAAAATTCAAGTTCGGAAAGTCATTCTTCCGGATTTAGTGGAAGTAGCATTGTTGGTGGGGTATCAGAATCAACAAAAGTACCCTCTGCACAACCTGAATGCAAAAATTACTCTCCAGATGGTACAACAACCTCTGAATCCTCTGATGCCTTAAGAAACAATCCAAGTCAACCATCAAATGGAGATTGCATGTACATCATTTCACTTGACATGAAGCATCTGCATGAATTGAATAATGATCACCCTTTAGCTGGTGGTATATTATCTTTTGAGAACGAAAAGGATGCTGCTGAAGAACCCCAGCCTACAGCACTTAGAGAGAAGAGATTCCGCAAGCCCACAAAGAGGTATATTGAAGAGTCTTCAAATTTGAGGTCAAAGGAAAAGGTACCGACTGCTGCTACAAAAAATAAAAATTTGAGTTTGTCATCATGTGATGAACTTAATGTGAGACCTAAAGCATTGGGAAAGATTCCGGACGAGAAGTATCGTAATGAAAATAGTGATGTGACACTTTCTGCGTTAAAAGTTTGCCGGGGACACCCAAAGAAAAAGAAACTTGAAAATGACAAGGAGCCACTTAGCTCAGAGTCTGAGGATGAACCCAAAAGGAAAGATCGGAGAAAGAGTCAGAAAATGTGGACTCTCCCTGAAGTGAAGAAGTTAGTTGATGGCATATCTGAATACGGAATTGGGCGATGGACTAATATAAAGAGGTTTTTCTTTTCTTCTTCAAGCTACCGAACACCCACTGATATCAGGGACAAGTGGCGTAATCTTTTAAGAGCCAGTTCTGCACAAAAATCTTACGACAAAGAGGCTGAGCAAAACGACGAGCTTGCCTTACGGCCCTTACCACTTGATGTGGTACACCGTGTTCGTGAATTGGCTAAAATTCACCCATACCCGAGGGCACGTGGCTCAAAGAAATCATGTGTTCGTAGTAGTCTTGGCAAAAGAAATTTTCAGAGGAAGAGGTGTTCTTAA	1335	0.4075	MDRKEYLRGHSNMKCQRVDESYVPVLKDDEMEDEHLLEEHRNGHISMDGSLDSHTTLNGMDDLGLEVLDGILDDVEINDLDGIDVFSGACDEYFLDCDFVNDPEVLGYGLSKGSLLQNSSSESHSSGFSGSSIVGGVSESTKVPSAQPECKNYSPDGTTTSESSDALRNNPSQPSNGDCMYIISLDMKHLHELNNDHPLAGGILSFENEKDAAEEPQPTALREKRFRKPTKRYIEESSNLRSKEKVPTAATKNKNLSLSSCDELNVRPKALGKIPDEKYRNENSDVTLSALKVCRGHPKKKKLENDKEPLSSESEDEPKRKDRRKSQKMWTLPEVKKLVDGISEYGIGRWTNIKRFFFSSSSYRTPTDIRDKWRNLLRASSAQKSYDKEAEQNDELALRPLPLDVVHRVRELAKIHPYPRARGSKKSCVRSSLGKRNFQRKRCS*	445

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan11g1424	444	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	320	381	IPR017930	-
Lan11g1424	444	SMART	sant	326	379	IPR001005	-
Lan11g1424	444	MobiDBLite	consensus disorder prediction	290	328	-	-
Lan11g1424	444	ProSiteProfiles	Myb-like domain profile.	322	377	IPR001005	-
Lan11g1424	444	MobiDBLite	consensus disorder prediction	226	242	-	-
Lan11g1424	444	MobiDBLite	consensus disorder prediction	138	173	-	-
Lan11g1424	444	MobiDBLite	consensus disorder prediction	299	328	-	-
Lan11g1424	444	PANTHER	MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	9	441	-	-
Lan11g1424	444	PANTHER	TRF-LIKE 8	9	441	-	-
Lan11g1424	444	Gene3D	-	316	427	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan11g1424	Lan-Chr11	23142720	23148463	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan11g1424	326	388	Single Myb Histone (SMH) Gene Family	AT1G17520	40.909	2.54e-06	47.4

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Lan11g1424		Myb_DNA-binding	1.1e-08	CL0123

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan11g1424	-		-	gmx:100810255	521.546

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