Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan11g1418 | ATGGCATCCAATAGAGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCGAAAAATGAAAAACTGGCTAGGTTGAAACAGGCCAAGGAAGAGGCTGAAAAGGAGATTGCAGAATACCGAGCTCAGCTTGAGCGTGAGTTTCAAAAGAAAGTTTCTGACAGTAGCGGAGATTCTGGTGCTAACGTTAAGCGGCTTGAGAAAGAGACTGATGAAAAAATTGCTCACCTGAAAACAGAGGCTGGAAGAATATCGGATGATGTTGTCACTATGCTCCTCAAGTATGTAACAACAGTCAAAAACTAG | 333 | 0.4324 | MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEIAEYRAQLEREFQKKVSDSSGDSGANVKRLEKETDEKIAHLKTEAGRISDDVVTMLLKYVTTVKN* | 111 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan11g1418 | 110 | Pfam | Vacuolar (H+)-ATPase G subunit | 7 | 109 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
Lan11g1418 | 110 | Coils | Coil | 10 | 59 | - | - | |
Lan11g1418 | 110 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT G | 1 | 110 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
Lan11g1418 | 110 | TIGRFAM | V_ATP_synt_G: V-type ATPase, G subunit | 3 | 109 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
Lan11g1418 | 110 | Gene3D | - | 1 | 110 | - | - | |
Lan11g1418 | 110 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT G1 | 1 | 110 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan11g1418 | Lan-Chr11 | 22918727 | 22921389 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan11g1418 | 1 | 110 | Primary Pumps ATPases(2) | AT3G01390 | 76.364 | 5.26e-46 | 142 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan11g1418 | K02152 | - | gmx:100306550 | 167.548 |