Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1416 ATGCCCAATTCAACCATGCAAAAAACTCTGTTCCTTCTTCTCCTTCTGCTCCTTCTCTGTGCCCCAAATACACATGGGTTTGGTTCCATGGGACCAATCTCTGCATCGTTCGGAAAAGATGAGTTATTCTGTGCCATTGATGCAAGTGGTAAACAAAATATCATTTGTTGGGGAAAAAACACTACATCACCTTTCTCATCACAACCTTCATCATCTTCTTCTTCTTCTCAGTCTTACTTCACAAGCATCCCTGCCATGTCAGCACTATCGGGTGGAGAAGGATTTCTTTGCGGCATTTTAGCAAACACCTCACAATCATACTGTTGGGAAGTTAGTACTACAACAACAATGATATCGAAACCGGGTGCAGATCTTGTTTTGGTACCTCCGGCGTACCGGAACACCGCTTATTCTCACATCGCGGCGGGGAAGAATCACGTTTGCGCCGTTAGAGGATCATACTTCGCCGATCATGATTCCGGCACGGTTGATTGCTGGGAACTGTCTAGAACATTGAACAACACGTTAATAGCGATACATAGCAATTCTTTCAATGACCAATTTACTAGCAATCTTGTACTAAACAAGATAGTTTCCGGCGAAGGGTTCACCTGCGGCGAGGTTCGAGATGGTGGACTTGTTTGTTGGGGACCGGAATCTACTCAATTGGGTGTTTCCAATTCCAACATGACAGGAAGTTTTTCTGTTTTAGCTTCTGGTAGAAGCTCAATTTGTGGAGTTACAAATGGTTCGGGTGATTTGAAATGTTGGGGTGAACCGAGTTCGTTTTCGAATCCTCCTCCAACGGTTGAGTTAATTTCGCTCTCAGCTGGGTCTAACCATTTTTGTGGGATCCGGAAGGATAACCATATAGTGGAGTGTTGGGGGAATTTGAATTCTTCGATGGTTCCTAAAAGTTATGGATTTATGGCTATTGCTTCTTCTGATTACACCACATGTGGTATAAGGGAAGCAGATCTTTTACTTGATTGTTGGTTGGTGAATGCTTCAAAAACCGATTTTGATCCACCGTTGGAACTTTCTAGTCCTGGTTTATGCAGGGGTAGTGAATGTAATTCTGGCGAGTTTGCCTTTAACGTGAGTGTGCTCAATGAGCCGGATTTAACTAGTCTATGTGTTAGACAGGATTTGAGGATTTGTTCCTCTTGTGGATCAAATTGTTCTCAAGGTTTCTTCTTGTCTAGCCCCTGTACTCAAAATTCGGATAGAGTTTGCATTGCTTGTTCTCTTTGCCAGAACAGTTCTTGTTATGATGTTTGTGGACTTCATTTTCATCATTCATCGCTTGAATTGCATTGGCATCATTTGCGTAGATTGGTTCTTATAATCGGGTCTTCTGCTTTGGGTTTCTTTCTTATTTTGATTTGTGGGTGTGTTTTACCACGTTTGGTTGGCAATAAAGGGAAAAAGAAAAATTCCAAGTCTAGCATAGAGGAAGATGAAGAGAATGTTGGTCTACACACTTCTCCTTCTATAGCTTCTTGTCCTGGTGTACCTCAAGTTTTCAGGCTTTCAGAGCTGAAAGATGCAACGAATGGATTTAAAGAGTTTAATGAGCTCGGTAGGGGAAGTTATGGCTTTGTTTACAAAGCTACATTGGCAGATGGGAAAGTGGTTGCTGTTAAGAGAGCAAATGCTGCTACTATAATACACACCAATAACCGCGATTTCGAGATGGAGCTGGAAATTTTATGCAAAATCCGTCATTGTAATATTGTTAATTTGTTGGGCTATTGTGCCGAAATGGGGGAGAGGTTGCTTGTGTATGAGTATATGCCTCATGGGACACTTAATGATCACCTACATGGTGGTCTTTCGCCTCTTAATTGGAGCCTCAGGTTAAAGATAGCAATGCAGGCTGCAAAGGGACTCGAGTACCTGCACAAGGAACTAGTCCCACCAATTGTTCATAAGGACCTAAAAAGTTCAAACATTCTTTTGGATTCAGAGTGGGGGGCTAGAATTGCAGACTTTGGACTTCTTGCATCTAGTGACAAAGTTCTTAATGGGGACCTTGAAAGCGATGTTTATAACTTTGGGATCGCTTTACTAGAGATTCTAAGTGGAAGAAAAGCCTATGACATAGACTTTTCGCCTCCAAACATAGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGAAAGGCGGCTGCCATAATTGATCGATATGTAGCACTTCCAAGAAATGTTGAGCCTTTGCTTAAGCTTGCGGATATAGCTGAGCTCGCAGTTAGAGAAAATCCAAGTCAGCGTCCACAAATGGTAGACATAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTGATCTTATAG 2334 0.4229 MPNSTMQKTLFLLLLLLLLCAPNTHGFGSMGPISASFGKDELFCAIDASGKQNIICWGKNTTSPFSSQPSSSSSSSQSYFTSIPAMSALSGGEGFLCGILANTSQSYCWEVSTTTTMISKPGADLVLVPPAYRNTAYSHIAAGKNHVCAVRGSYFADHDSGTVDCWELSRTLNNTLIAIHSNSFNDQFTSNLVLNKIVSGEGFTCGEVRDGGLVCWGPESTQLGVSNSNMTGSFSVLASGRSSICGVTNGSGDLKCWGEPSSFSNPPPTVELISLSAGSNHFCGIRKDNHIVECWGNLNSSMVPKSYGFMAIASSDYTTCGIREADLLLDCWLVNASKTDFDPPLELSSPGLCRGSECNSGEFAFNVSVLNEPDLTSLCVRQDLRICSSCGSNCSQGFFLSSPCTQNSDRVCIACSLCQNSSCYDVCGLHFHHSSLELHWHHLRRLVLIIGSSALGFFLILICGCVLPRLVGNKGKKKNSKSSIEEDEENVGLHTSPSIASCPGVPQVFRLSELKDATNGFKEFNELGRGSYGFVYKATLADGKVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLNDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARIADFGLLASSDKVLNGDLESDVYNFGIALLEILSGRKAYDIDFSPPNIVEWAVPLIKQGKAAAIIDRYVALPRNVEPLLKLADIAELAVRENPSQRPQMVDIASWLEQIVKDGLIL* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1416 777 Gene3D - 32 180 IPR009091 -
Lan11g1416 777 Gene3D Transferase(Phosphotransferase) domain 1 599 774 - -
Lan11g1416 777 Gene3D Phosphorylase Kinase; domain 1 483 598 - -
Lan11g1416 777 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Lan11g1416 777 MobiDBLite consensus disorder prediction 473 496 - -
Lan11g1416 777 MobiDBLite consensus disorder prediction 478 492 - -
Lan11g1416 777 PANTHER OS01G0750732 PROTEIN 30 775 - -
Lan11g1416 777 ProSiteProfiles Protein kinase domain profile. 521 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1416 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lan11g1416 777 Pfam Protein tyrosine and serine/threonine kinase 525 670 IPR001245 GO:0004672|GO:0006468
Lan11g1416 777 SUPERFAMILY RCC1/BLIP-II 52 326 IPR009091 -
Lan11g1416 777 SMART serkin_6 521 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1416 777 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 357 412 IPR001368 GO:0005515
Lan11g1416 777 Gene3D - 181 342 IPR009091 -
Lan11g1416 777 SUPERFAMILY Protein kinase-like (PK-like) 497 768 IPR011009 -
Lan11g1416 777 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 30 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1416 Lan-Chr11 22761286 22764084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1416 5 769 Receptor kinase-like Gene Family AT3G59420 31.205 3.21e-112 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lan11g1416 PK_Tyr_Ser-Thr 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1416 - - gmx:100814476 1169.45