Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1404 ATGAACTCCAACACTTGCAATTCTTCTCCTAAGTCAATGGAAACATCATCAACTACAACAACTACACCATCTGATGCTTCTGCCAAGAAGGTTAGAAAGCCTTATACTATTACCAAGTCTAGAGAGAGTTGGAGTGATGAAGAACATGATAAGTTTCTTGAAGCTCTTCAATTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAATCAGTTATTCAGATTCGAAGCCATGCCCAAAAATACTTCTTGAAAGTTCAAAAGAATGGGACAATGGCACATGTGCCTCCTCCTCGTCCTAAGCGCAAAGCCGCTCATCCTTACCCACAAAAGGCATCAAAAAATGTTTTGATGCCACTGCCAGCATCCATTGCTTTTGCTTCCTCGATCCTTGCACCCGGGTATGCCACTTGGGGTGAAACTTCCCTGCTGATGAATGCTGGATCAAATCAGTCGATGACTTGTGAAGAAGAACTCGGCAATCTTCATGGAAACGAAGCTGATATTGGAATAAAGGGGATAACACAGATTGGCAACAGCAATCTCAGTGGTGTTGGGAATTCTAATAGAACGCTACTAACTTCTGACATGCAAAATCATGGGAAACAAGCTCCAATGCTTCATGGTTTGCCTGACTTTGCTGAAGTTTATAGCTTTATTGGAAGTGTTTTTGATCCAGAATCAAATGGCCATGTCCAAAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGCTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCCGACTTTGAGCCTATTAAGAATGTATTGTCAACATATGATGACAATACCTTGGAACATGGAGTTAGTGCAGGAATTGATGCCAAGAAGCAACCAAATGATCTCTCATGTCAAGGTTCTTAA 909 0.4037 MNSNTCNSSPKSMETSSTTTTTPSDASAKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKSVIQIRSHAQKYFLKVQKNGTMAHVPPPRPKRKAAHPYPQKASKNVLMPLPASIAFASSILAPGYATWGETSLLMNAGSNQSMTCEEELGNLHGNEADIGIKGITQIGNSNLSGVGNSNRTLLTSDMQNHGKQAPMLHGLPDFAEVYSFIGSVFDPESNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPDFEPIKNVLSTYDDNTLEHGVSAGIDAKKQPNDLSCQGS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1404 302 Gene3D - 44 91 - -
Lan11g1404 302 PANTHER PROTEIN REVEILLE 8 8 295 - -
Lan11g1404 302 PANTHER SWI/SNF COMPLEX-RELATED 8 295 - -
Lan11g1404 302 MobiDBLite consensus disorder prediction 1 43 - -
Lan11g1404 302 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Lan11g1404 302 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
Lan11g1404 302 Pfam Myb-like DNA-binding domain 41 86 IPR001005 -
Lan11g1404 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Lan11g1404 302 SMART sant 40 88 IPR001005 -
Lan11g1404 302 CDD SANT 43 86 IPR001005 -
Lan11g1404 302 MobiDBLite consensus disorder prediction 1 27 - -
Lan11g1404 302 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 88 IPR006447 GO:0003677
Lan11g1404 302 ProSiteProfiles SANT domain profile. 39 92 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1404 Lan-Chr11 22279278 22289743 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan11g1404 Myb_DNA-binding 8.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1404 - - adu:107474168 457.218