Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1393 ATGTTGACTTGCATAGCATGTACCAAGCAACTGAATAGTAATGGATCTCTTCACCAACAAGAAGAAGATGAAGAAGCTGTTCATATACCAAGTACCAAACATGCCATCAAGAATATTACTTCACAAATCAAGGACATGGCAGTGAAGGCTTCAGGGGCCTATAAGAATTGCAAGCCTTGTTCAGGATCTTCCAATGGTAACCGGAATGGAAACTATGCTGACTCCGATTTAGGCTCGGATTCAGCTAGGTTTAACTTGGCATACCACAGAACAGGAAGCTTCAATTCGACCCCGAGGCTGTGGGGGAAGAAAGTGGAAGCTAGACTGAAGGGGATTTCCAGTGGGGAAAGAACACCGACATCGGTGAGTGGAAGAACGGAGTCGGTGATGTTCATGGAGGAGGGTGAATCAAAGGAATGGATTGCACAAGTGGAACCTGGTGTGCTCATTACCTTTGTTTCTTTGCCTCAGGGTGGCAATGATCTGAAGAGGATACGGTTCAGTCGTGCAATGTTTAATAAGTGGCAAGCTCAGAGATGGTGGGCTGAGAATTGTGACAAGGTTATGGAATTGTACAATGTTCAAAGGTTCAATCAACAATCAGTTCCTCTTCCAACCCCACCTATATCTGAAGATGAGAGTTCGAAGATTGAATCTGCCAGGGATAGCCCGGTGACTCCTCCTCTCAGCATAGAGCGTGCACCCCGTCATCTTCACCACCAACTAAAGGGAATGGGCTACTCCTCATCAGATTCACCGGATCACCACCGAATGAAACCTCAACCTTGCTACAAAACAATCGGCCAATCATCGACACCTAATCTTTCCAACATGAGTAGGCCAAAGACTGAAAGACAATCCATTGATGGTTCTGTAAGGACTAGTTCATCAAGAGAGGATGACCACTCAGGTGAGTTTTCTATCAGCAATGCTAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCATTATAAGATCACTACCAGGCGGAGCCCGAGAAGTTAGGCGTGTCCGATTCAGCCGAGAAAAATTTGGAGAAATGCACGCCAGACTATGGTGGGAAGAGAACTGTGCTAGGATACAAGAGCAATACTTATGA 1116 0.4552 MLTCIACTKQLNSNGSLHQQEEDEEAVHIPSTKHAIKNITSQIKDMAVKASGAYKNCKPCSGSSNGNRNGNYADSDLGSDSARFNLAYHRTGSFNSTPRLWGKKVEARLKGISSGERTPTSVSGRTESVMFMEEGESKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSRAMFNKWQAQRWWAENCDKVMELYNVQRFNQQSVPLPTPPISEDESSKIESARDSPVTPPLSIERAPRHLHHQLKGMGYSSSDSPDHHRMKPQPCYKTIGQSSTPNLSNMSRPKTERQSIDGSVRTSSSREDDHSGEFSISNASDMETEWVEQDEPGVYIIIRSLPGGAREVRRVRFSREKFGEMHARLWWEENCARIQEQYL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1393 371 MobiDBLite consensus disorder prediction 264 293 - -
Lan11g1393 371 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Lan11g1393 371 MobiDBLite consensus disorder prediction 200 315 - -
Lan11g1393 371 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 371 IPR044532 -
Lan11g1393 371 Pfam Transcription factor regulating root and shoot growth via Pin3 315 370 IPR013591 -
Lan11g1393 371 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Lan11g1393 371 ProSiteProfiles BRX domain profile. 316 371 IPR013591 -
Lan11g1393 371 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 371 - -
Lan11g1393 371 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1393 Lan-Chr11 21667194 21671731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1393 1 371 Major Intrinsic Protein MIP AT1G31880 44.703 2.17e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1393 - - gmx:100805480 612.453