Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1381 ATGGGCGAAGAAGTAGTGGTTTGTGTGCTAGCATTAGAAAATGGAAGGAATGAAAACAATGAGGAATCAAGAACAGAATTGAAGCGTGATTACCACCAATGCATTGCTGATACAGTTGATGATAATACGGAGCCTGGCCAGTCTCCGAAAAAGAAACAAGTGAAAGATGATTCCAACGATGAAGTTTGCTCAGATGTTATGAACCCTAAAACTTCTGCAACGGAGAATGAGTTAACCACCTTCCATGATATCAGTAGCCAACCGAGTGAATCAGCGAAAACTTTTGAGTGTGGAGAACTCACTTGTACTTGTTTGGAGAATTCAAGTTCTTCTGATGAGACATTGAGTGATGAAGCCAGCGATCAGAATAATAAGAACAATATTAGTAATACATCTCACAATGATATGGACACAAGTGACATGACAATGTCATGTGTTGTGATGGAAATACCTAAGCATGCTAGTTTATCTGGTATTAGGAAGATTACTTTTAAGTTCAGTAAGAAGAAAGAGGACTATGATGAAGAATATTCGGCTAAGCCTGATTTAGATAATAATAGTGAGTTGTATGAAAACTCGTGTGGAATGGGATATGTTGGAACCGGAGATATAGACTTCTATACTGCTCGTAATATGGAATTGAAAATGTCGAAGAAGGTTGTCCCCAACTACTACCCTACAAATGTTAAAAAGCTGTTATCAACTGGTATCCTCGACGGAGCTATAGTGAAATATATGTACAACCCCATGAAGGTTGAACTACGTGGGATTATTGGCGGTGGTGGATACTTGTGTAGCTGTTCCCTGTGCAATTACTCCAGAGTGCTTAGTGCGTATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGACATCCGAACAATCATATATATTTAGAGAATGGAAAGCTGATATACAGCATTATACAGGAAATAAAAGCTGCTCCACTCAGCATATTAGATGAGGTTATAAAGAATGTGGCCGGTTCATCTGTCAATGAGGAGTGCTTCCAGGCTTGGAAAGAAAGCCTTCTAGAAAGCAATGGGAGGGTTCAGGCTTATAAAAATTATAGCACAAAACTAACTGGGATGCCTCATAAACACATAAGTCAATCTGTAGAAAGTGTGAGCCACTTGTCTTCTTTGCATGTTCCGAGCCATTTTGTGCAGCAAATGTATCTGAAGCGGACAACTGATGAGTGGAAATATGCGGTGAAGAAAAGCTCCTGCCTGTATAACTCAGGCATACAGCTGAAGAGAAGTGCTGATAGCTGCACTAAGAGAAGGGACAATGATTTACACAGACTACTTTTTATGCCAAATGGACTACCAGATGGTGCTGATTTGGCATACTCTGTCAAGGGACAGAAATTACTTGGAGGTTACAAACAGGGGAACGGTATAGTCTGTGGTTGTTGTGACGTAGAGATAAGCCCCTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGACGTCAACCTTACCGACACATATACACTTCCAGTGGATTAACACTTCATGATATAGCTCTCTCCCTGGCAAGTGGTCAAAACCTTGCCATGGGAGATAGTGATGATATGTGTGCAATATGTGGAGATGGAGGGGACTTGATTCTTTGCAATGGATGTCCTAGGGCTTTTCATGCAGCCTGCTTGGGTTTAGAGTGTGCTCCAGAAAGTCGTTGGCATTGTCTAAACTGTAGAGATAATGTTGATAATGGAAGAGAATCTTCTATGGAGAGGCCAATCATGATACAATTGACACGAGACGATAAAGCTCCAGAGTTTGAAACGGGGGGATGTGTTGTTTGCAGGCAACATGATTTCAGTGTTGCTAAATTTGATGAGCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGCTGGACATTGGGCTATGTGAGTTGGATGAGCTGCCTAAGGATAAATGGTTTTGTTGTGATGACTGCAACGGAATATACTTGGCTCTTCAGAATTCATTTTCTGCTGGAGCAGACATTATACAAACTTCCTTGTCAGAACTGATAATCAAGAAGCACGAGGAGAGGGGATTATGTACCTATGAAGGCATGAGTGACATCCAGTGGAGAATTTTAAGTGGGAAGAGTCGTTATCCAGAGCATTTACCTATACTTTCACGTGCTGCTGAAATTTTTCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGTCGTGACCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAATTTGGGGGGATGTATTGCACTGTTTTAGTTGTAAACTCTGTTATTGTATCTGCTGGGCTGCTTAGGATTTTTGGATGTAATGTTGCGGAGCTTCCACTAGTAGCTACAAGCAGAGAATATCAAGGAAAAGGTTATTTTCAAGTGCTATTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTTAACGTAGAAAAGCTGGTGGTTCCTGCAGCAGGGGATGCTGAGTCAATTTGGACAAAGAAATTAGGCTTTCGAAAGATGACTGAAGATCAGTTATCCAAATATCTTAGGGAGGTGCAGCTCACCCTATTCAATAAAACTTCAATGCTTGAGAAGACAGTGCAACCAGGAAGAAAGTGA 2616 0.4132 MGEEVVVCVLALENGRNENNEESRTELKRDYHQCIADTVDDNTEPGQSPKKKQVKDDSNDEVCSDVMNPKTSATENELTTFHDISSQPSESAKTFECGELTCTCLENSSSSDETLSDEASDQNNKNNISNTSHNDMDTSDMTMSCVVMEIPKHASLSGIRKITFKFSKKKEDYDEEYSAKPDLDNNSELYENSCGMGYVGTGDIDFYTARNMELKMSKKVVPNYYPTNVKKLLSTGILDGAIVKYMYNPMKVELRGIIGGGGYLCSCSLCNYSRVLSAYEFEQHAGAKTRHPNNHIYLENGKLIYSIIQEIKAAPLSILDEVIKNVAGSSVNEECFQAWKESLLESNGRVQAYKNYSTKLTGMPHKHISQSVESVSHLSSLHVPSHFVQQMYLKRTTDEWKYAVKKSSCLYNSGIQLKRSADSCTKRRDNDLHRLLFMPNGLPDGADLAYSVKGQKLLGGYKQGNGIVCGCCDVEISPSQFEAHAGMAARRQPYRHIYTSSGLTLHDIALSLASGQNLAMGDSDDMCAICGDGGDLILCNGCPRAFHAACLGLECAPESRWHCLNCRDNVDNGRESSMERPIMIQLTRDDKAPEFETGGCVVCRQHDFSVAKFDERTVIICDQCEKEYHVGCLLDIGLCELDELPKDKWFCCDDCNGIYLALQNSFSAGADIIQTSLSELIIKKHEERGLCTYEGMSDIQWRILSGKSRYPEHLPILSRAAEIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCTVLVVNSVIVSAGLLRIFGCNVAELPLVATSREYQGKGYFQVLFSCIERLLSSLNVEKLVVPAAGDAESIWTKKLGFRKMTEDQLSKYLREVQLTLFNKTSMLEKTVQPGRK* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1381 871 Pfam Tify domain binding domain 460 509 IPR032308 -
Lan11g1381 871 Pfam Tify domain binding domain 256 310 IPR032308 -
Lan11g1381 871 PANTHER AUTOIMMUNE REGULATOR 26 867 - -
Lan11g1381 871 CDD PHD1_AIRE 526 566 - -
Lan11g1381 871 MobiDBLite consensus disorder prediction 44 63 - -
Lan11g1381 871 SUPERFAMILY FYVE/PHD zinc finger 598 652 IPR011011 -
Lan11g1381 871 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 26 867 - -
Lan11g1381 871 Gene3D - 697 865 - -
Lan11g1381 871 MobiDBLite consensus disorder prediction 38 76 - -
Lan11g1381 871 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 755 840 IPR016181 -
Lan11g1381 871 SMART PHD_3 526 567 IPR001965 -
Lan11g1381 871 SMART PHD_3 599 656 IPR001965 -
Lan11g1381 871 ProSitePatterns Zinc finger PHD-type signature. 527 566 IPR019786 -
Lan11g1381 871 MobiDBLite consensus disorder prediction 111 138 - -
Lan11g1381 871 SUPERFAMILY FYVE/PHD zinc finger 522 570 IPR011011 -
Lan11g1381 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 520 596 IPR013083 -
Lan11g1381 871 ProSiteProfiles Zinc finger PHD-type profile. 524 569 IPR019787 -
Lan11g1381 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 597 657 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1381 Lan-Chr11 21230162 21240432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1381 18 866 PHD Transcription Factor Family AT3G53680 52.650 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1381 - - gmx:100808999 1355.5