Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1370 ATGGAACACCCATCAATATTCTCAGGCCTAAAAATAATGTCCAAAGAAAAAGACACCAAACACAATCCTCCAAATTTAGTTGCCAAATTAATGGGACTTGAAGCATTTCCTAGTGGAGAGTTAAATTTAGCTATAGATAGAAGCCAGAAAAATTATTATTCTCAAAATGTGTATGGTTTTCATTCTGGGTCACCATTGAATAAGGAAATTTCAATGCTTCATGAAGTTCATCATGCAAGTCCAGAACAAGTTTCTTACAGGGATATCTATGAAAAATGGGTGCAAAATTCTCAGAGAACTACAAGTCATGTAAGAGGCAAGACAGGGTTAACAAAGTGGAGTGAAGAAGATGTTGATGGGAAAAAGATGGCTCTCGTTCATCAGAATTTCATGGAAGCAAAAAGGATGCTTGCTGATGAGAGATTGCGCCGGTCGACGCAATTTTCGGATGCCTTGGAAGTTTTAAGCTCCAATAGTGATCTCTTAATCAAGTTAATGGATGAACTTCATTGTGCTTCAACTCCACTATCTGAGACAAACAACATTAATCTCCTTAAACCTTTGAAGATTGTTGATAATGACAATGCTGGAATGAAGAATAAAAATGATGAGAAACACTATTCTTGTTCAGCAAGCAAGGAAGTTGAGGAGTTTCGAGTTCAATCTACTAGAATAGTGGTATTGAAGCCTAGCTCTGACGTTTCTCCAACAACTTTATCAACTAGAAATTTTCAAAGTGGAAATTTCTATGAGAGACCAGAAACTTTGTATTCTTCACTCTTTTCCAATAGAGGTGATGAAAGTTCATGTAACAAACCAGATCATGATGATTTTGAAGCTATGTCAACATTTTCAATGCATTCATTGGATACCATCAATGGGTTTGGTGCAGGTTCTTATTCTCCTGAGTCATCAGTGTACAAAGAAGCAAAGAAAAGACTTTCTGAAAGATGGACCATAATGGCATCAAATAGTAATGTTGTTCAAGAACAAATGCATGTGAAAAAAAGTTCTACTTTGGGAGAGATGCTTTCTAAGAAATCTGTTACATCAGAAGTTGAGGGTATTATTATTAATGAAGACCAAAAACCAACCAAATTTGTTTCTTGCAGTGATTCTTCTACTGATGAGGAAATAAGAATTCATTCTTCTGCTAAAACTCTTCCTATGTCAAGTTATGTCACTGGTTCTTCTGCTGTCTGTGAAACTGGTCTCAGAGTTGAAGTTTCTGATCATGATGATGCTATCATAGCACATGGATCCAAGGTGGTGAAAAAGTCAAAAAGTGTGAAATCATCATTTAAGGGGAAAGTTATGAGTTTCTTGTTCTCAAGGAATAAGAAACCAACAAAGGAAAAGTGTAATCTTTCTCAATCTAGTGTTACTGAAACATCAGTGTCTTCAGTAAATTCACTTGGACTCATTAGGGATGATGTGTTTCAAAGTTTCAATAGCTTTGAAGAGTGCTCTCTTTCATCTCTATGTGGATCATTAAACAAAACATTATCAGATTCAGTCTCTAATGGACAACAGCAAGGAATAATTACTCCAGAGCCTGGATTGAGTGTATCGAAGACCATGGTGCCAGAGATTTCAAGTGAAAACCAGGATCAGCCAAGTCCAATCTCAGTTTTAAACCCTCCCTTTGAAGATGATAATGCTGCTCATGATTCCTTTGAATATATGAAGGGTGGTCACTTGGGATCAATGATGCTTCTCAAGACCAATGTAATTGACAAATCACCACCTATAGAATCAATAGTTAGAACCCTATCATGGAATGATTCATGTTCAGAACTAGCAAGTCCATATTCATTCAAACCCTTGATGGTTTCTTCCTTAGACTCCAAGTTTGAGGGACAAGAGTTGCATCTCTTAGTGGAAAAGCTACTATCAACCGCTGGACTCGATGATCAAGTACAATTCAATTCATTTTACCCTATATGGCATTCACTTGAAAGCCCACTTGACCCATCATTAAGGGACAAATATGCCTATAATCTGAATATTAAGGACCCTCCTCATTATCAACCTCTCTATGAGGCCAAGAGAAGGAAAATGAGATCAAATCAGAAACTTGTGTTTGATTGTGTGAATGCTGCACTATTGGAAATGACTAGTAGTCATTATGGATCAGAGAAGTACTTCTTGAAGAGCAGAATGTGTAGTGGGACCCACACAGTCCAAGAGGGTGAATTATGTCCATATTTGATGGACCACATTGTGGCCCAAATGAAGGATTTAATAGGTAGTGAGGTAAGGTTTGTTTGGAGGGATAGTGGGGACAGTAACAGGCTGGTGGTAGAAAATGTTGTAAGGAAAGAGGTTGTGGGGATAAGGTGGGTTGAGCTTATGGAATTGGAGATTGATATTTTGGAGAGGGAAATAGAGAGAAAGTTGATACAAGAGCTCGTGGAGAATGTTGTAGCTGATTTCACTTCTGGCATGGCTTGA 2454 0.3765 MEHPSIFSGLKIMSKEKDTKHNPPNLVAKLMGLEAFPSGELNLAIDRSQKNYYSQNVYGFHSGSPLNKEISMLHEVHHASPEQVSYRDIYEKWVQNSQRTTSHVRGKTGLTKWSEEDVDGKKMALVHQNFMEAKRMLADERLRRSTQFSDALEVLSSNSDLLIKLMDELHCASTPLSETNNINLLKPLKIVDNDNAGMKNKNDEKHYSCSASKEVEEFRVQSTRIVVLKPSSDVSPTTLSTRNFQSGNFYERPETLYSSLFSNRGDESSCNKPDHDDFEAMSTFSMHSLDTINGFGAGSYSPESSVYKEAKKRLSERWTIMASNSNVVQEQMHVKKSSTLGEMLSKKSVTSEVEGIIINEDQKPTKFVSCSDSSTDEEIRIHSSAKTLPMSSYVTGSSAVCETGLRVEVSDHDDAIIAHGSKVVKKSKSVKSSFKGKVMSFLFSRNKKPTKEKCNLSQSSVTETSVSSVNSLGLIRDDVFQSFNSFEECSLSSLCGSLNKTLSDSVSNGQQQGIITPEPGLSVSKTMVPEISSENQDQPSPISVLNPPFEDDNAAHDSFEYMKGGHLGSMMLLKTNVIDKSPPIESIVRTLSWNDSCSELASPYSFKPLMVSSLDSKFEGQELHLLVEKLLSTAGLDDQVQFNSFYPIWHSLESPLDPSLRDKYAYNLNIKDPPHYQPLYEAKRRKMRSNQKLVFDCVNAALLEMTSSHYGSEKYFLKSRMCSGTHTVQEGELCPYLMDHIVAQMKDLIGSEVRFVWRDSGDSNRLVVENVVRKEVVGIRWVELMELEIDILEREIERKLIQELVENVVADFTSGMA* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1370 817 Pfam Domain of unknown function (DUF4378) 627 806 IPR025486 -
Lan11g1370 817 Coils Coil 782 802 - -
Lan11g1370 817 Pfam Protein of unknown function (DUF3741) 128 167 IPR022212 -
Lan11g1370 817 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 250 814 - -
Lan11g1370 817 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 11 254 - -
Lan11g1370 817 MobiDBLite consensus disorder prediction 1 23 - -
Lan11g1370 817 PANTHER DUF3741 FAMILY PROTEIN 11 254 - -
Lan11g1370 817 PANTHER DUF3741 FAMILY PROTEIN 250 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1370 Lan-Chr11 21018686 21023070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1370 13 813 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 34.340 2.28e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1370 - - lang:109359124 1551.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0471 9 7013362 7018836 Lan11g1370 11 21018686 21023070 PCT
Lan19g0481 19 6999126 7004589 Lan11g1370 11 21018686 21023070 PCT
Lan11g1370 11 21018686 21023070 Lan9g0471 9 7013362 7018836 PCT
Lan11g1370 11 21018686 21023070 Lan19g0481 19 6999126 7004589 PCT