Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1367 ATGGCAGCAGCACTAACGTGTTCCATCACAGAACTCAACTCTCTTCTCCACAGTGCCAATGGTTCCACTCCCATTGCTGCAGCTGAATACATTTGTCAAAGATTTGATGCCATTTCAAACAAGTTCACTGATACAACCTATGCATTGGACAACACATATCTTCTCTTTTCAGCATACCTTGTTTTCGCCATGCAACTTGGTTTTGCAATGTTATGTGCAGGTTCCGTGCGTGCCAAGAATACCATGAACATCATGCTAACAAATGTTCTTGATGCTGCAACAGGTGGCATCTTCTATTACCTCTTCGGTTTCGCATTTGCTTTCGGCACTCCATCCAATGTTTTCATTGGAAAACACTTCTTTGGGCTAGAGAAGTTTCCTTCAATTTCTTTTGATTATGGTTACTTTCTTTACCAATGGGCTTTCGCAATCGCGGCTGCTGGGATCACGAGCGGTTCCATCGCTGAAAGAACACAATTTGTGTCTTATTTGATTTACTCTTCATTCTTAACCGGCTTGGTTTATCCAATTGTGTCTCATTGGTTCTGGTCACCTGATGGGTGGGGTAGCCCTGCAAGGTCTGAAAATCTGTTGTTTGGAACTGGTGTCATAGATTTCGCTGGCTCGGGTGTGGTTCATCTGGTTGGTGCTGTTGCTGGTTTCTGGGGTGCTATAATGGAAGGCCCGCGTATGGGTAGGTTTGATCATGAAGGAAGACCGGTCCCGCTGCGAGGACATAGTGGCACTTTGGTTGTTTTAGGAACATTCTTGTTGTGGTTTGGTTGGTATGGATTTAACCCGGGTTCATTTCTTAACATTTCGAAAATTTACGGCAAAAGTGGAGATTACTACGGGCAATGGAGTGCCGTTGGGAGGACTGCAGTGACAACAACGCTAGCTGGATGTTCAGCAGCACTAACCACATTGTTTGGGAAAAGACTACAAACTGGGCATTGGAATGTAACGGATGTTTGCAATGGTTTACTTGGTGGGTTTGCTGCTATAACTGCAGGGTGTTCTGTGGTGGAACCATGGGCTGCAATTATTTGTGGGTTTGTGGCTGCTTGGGTTCTAATTGGTGCTAACATGCTAGCTGAAAAGTTCAAGTATGATGATCCATTAGAGGCTGCACAACTTCATGGTGGTTGTGGAACTTGGGGAATAATTTTCACTGCATTGTTTGCTACTAAGCAGTATGTGAATGAGGTCTATCCAGGGTTCCCTGATAGGCCTTATGGTTTGTTTATGGGAGGGGGTGGAAAGCTTTTGGCTGCACATCTTATTCAGATTTTGGTGATCTTAGTTTGGGTGAGTGTGACCATGGGAACTGTGTTCTTTTTGTTGCATAAGTTGAAGTTGCTGAGGATCTCAAATGAAGAGGAAATGAATGGACTTGATGTAACTAGCCATGGTGGATTGGCATATGTTTATAATGAAGAGATTGAGCTTGCAAAGAAATATGCATTTGGAGCAACAGGGACAGATTCTTCAGCAGTAGCCTGA 1503 0.4405 MAAALTCSITELNSLLHSANGSTPIAAAEYICQRFDAISNKFTDTTYALDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYLFGFAFAFGTPSNVFIGKHFFGLEKFPSISFDYGYFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVSHWFWSPDGWGSPARSENLLFGTGVIDFAGSGVVHLVGAVAGFWGAIMEGPRMGRFDHEGRPVPLRGHSGTLVVLGTFLLWFGWYGFNPGSFLNISKIYGKSGDYYGQWSAVGRTAVTTTLAGCSAALTTLFGKRLQTGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAAWVLIGANMLAEKFKYDDPLEAAQLHGGCGTWGIIFTALFATKQYVNEVYPGFPDRPYGLFMGGGGKLLAAHLIQILVILVWVSVTMGTVFFLLHKLKLLRISNEEEMNGLDVTSHGGLAYVYNEEIELAKKYAFGATGTDSSAVA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1367 500 Gene3D Ammonium transporter AmtB like domains 29 490 IPR029020 -
Lan11g1367 500 PANTHER AMMONIUM TRANSPORTER 1 488 - -
Lan11g1367 500 Pfam Ammonium Transporter Family 53 475 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lan11g1367 500 TIGRFAM amt: ammonium transporter 50 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lan11g1367 500 ProSitePatterns Ammonium transporters signature. 205 230 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lan11g1367 500 PANTHER AMMONIUM TRANSPORTER 1 488 - -
Lan11g1367 500 SUPERFAMILY Ammonium transporter 47 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1367 Lan-Chr11 20899101 20900603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1367 1 480 Inorganic Solute Cotransporters AT4G28700 77.433 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1367 K03320 - jre:109020544 826.239