Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1359 ATGGCTACCTCACTTGCACTGGTAACTAAAATTTCTCCTTCCACACTTTGCAGTTTGGCTGAAGCAAGGCAACCATTATGGCGTAAAGTCTCAATACCTTCAAGCCTAATCAACCCATACCGCATAGTCATAATCCTGCGTTTCACTATCCTAGTTTTCTTCTTCCAATATCGCATCTCGACACCAGTTCATGATGCATTCGCCTTATGGTTAATCTCAGTAATCTGTGAAGTCTGGCTTGCATTGTCTTGGCTGCTTGACCAACTCCCAAAGTGGTTCCCCATCACTCGTGAAACTTACCTCGACCGCTTGTCCATAAGATTTGAGGAAAAGCTTCTAGGACCTGTTGATATCTTTGTGACCACTGCAGACCCTTTGAAAGAACCACCTATAATCACAGCAAACACAGTTTTATCGGTCTTGTCTGTTGAGTACCCTGCTGAGAAGGTTAGCTGCTATGTCTCAGATGACAGTGCATCTATGCTTCTCTACGATACCTTGTCGGAAACAGCTCAGTTTGCAAGGATATGGGTTCCTTTTTGTAACAAGTATAACATTGAGCCAAGGGCACCTGAGTCTTATTTCTCTCAGAAAGTTGATTACTTGAAAGATAAGGTGCACCCCGCATTTGTTCGGGACCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAGAATTAATGTATTGGTTGCAGAGGCTCAGAAAAAACCTGAAGAGGGGTGGGTAATGCAAGATGGTACACCATGGCCTGGGAACAACACTGATGATCATTCAGGAATGATTCAGGTGTGTCTGGGAAGTGCTGGTGCACCAGACAAGGAAGGAAAGGAACTACCACGGCTTGTATACATTTCAAGGGAAAAGCGTCTCGGTTATAAACACCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGTGTTTCTGCTGTGCTTAGCAATGCACCTTTTTTGTTGAATCTGGATTGTGACCAATACATAAACAATAGCAAGGTTCTAAGGGAGGCTATGTGCTTTTTAATGGACCCTCAACTTGGAAAGAAGCTTGCTTATGTCCAATTTCCACGAAGGTTTGATGGCATCGATTGCAACGATAGATATGCTAATCACAATACAGTGCTATTTGATATCAACATGAAAGGCCTTGATGGGATTCAAGGCCCAGTGTATGTTGGTACCGGATGTGTGTTCAATAGGCAAGCATTATATGGCTATAAGCCACTATCTGAGAAAAGGTCAAAGATGAGCAGTTCCTCCTGGCCTTCATGCTGCTGTTGTTCTGGTGACTCTCGTTCCATTTTTGATCTTGAAGAGATGGGTGAAGAGCTTGAAGGCTTTGACGAGCAAGAGGAACCATCCTTCACGTCAAAGAAAAATTTTGAGAAACGATTTGGACAGTCACCGGTTTTCATTGCTTCCACTTTGATGGAAGATGGTGGACTTCCAAAAGGCATCAATTCTAGATTAATGATGAAGGAGGCCATTCATGTTATAAGCTGTGGATATGAAGAGAAAACTGAATGGGGCAAAGAGATTGGATGGCTTTATGGTTCAGTCACAGAAGACATCTTAACTGGTTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCAGAAAGAGCAGCTTTTAAGGGATCCGCTCCGATAAATCTGTCAGATCGATTACACCAAGTTTTGAAATGGGCTCTTGGTTCTACTGAGATTTTCTTTAGTGGGTATTGCCCATTATGGTATGGCTATAGTGGAAAACTGAAATGGCTCCAGCGGCTGGCATACACTAATGCCATTGTTTATCCATTCACTTCCATCCCTCTTTTGGTATACTGTACAATTCCCGCTGTCTGTCTTCTGACTGGAAAGTTCATCATGCCCACTCTGACAACCCTTGCTAGCATTTGGTTAATGGCTCTATTTATCTGCATCATTTTAACTTGTGTTCTTGAGCTCCGGTGGAGTGGAGTCAGCATTCAGGACTGGTGGCGCAATGAACAATTCTGGGTCATCGGAGGTGTTTCTGCACATCTTTTCGCTGTATTTCAAGGTCTCCTTAAAGTTGGTGGACTAGACACTACTAATTTCACTGTGAGAGAAAAAACAGCAGATGGCACTCTATTGGGAAAGCTCTATCTGTTCAAGTGGACTACTCTTCTCATCCCACCAACAAGTCTTGTAATCTTGAATATGGTGGGAATCGTGGCCGGAATCTCTGACGCCATTAACAATGGCTATGACTCATGGGGCCCTTTATTTGGGAAGTTATTCTTTTCCTTCTGGGTCATTGTGCACCTATATCCTTTCCTCAAAGGTCTAATGGGAAGGCAAAACAGAACTCCTACTATAGTAGTCCTCTGGTCAATACTTTTAGCATTAATTTTCTCAATGATTTGGGTGCGCTTTGATGTTTTCTTGCCCAAGAAAACAGGTCCAATTCTCAAACAATGTGGAGTAGATTGCTAA 2469 0.4305 MATSLALVTKISPSTLCSLAEARQPLWRKVSIPSSLINPYRIVIILRFTILVFFFQYRISTPVHDAFALWLISVICEVWLALSWLLDQLPKWFPITRETYLDRLSIRFEEKLLGPVDIFVTTADPLKEPPIITANTVLSVLSVEYPAEKVSCYVSDDSASMLLYDTLSETAQFARIWVPFCNKYNIEPRAPESYFSQKVDYLKDKVHPAFVRDRRAMKREYEEFKVRINVLVAEAQKKPEEGWVMQDGTPWPGNNTDDHSGMIQVCLGSAGAPDKEGKELPRLVYISREKRLGYKHHKKAGAMNALVRVSAVLSNAPFLLNLDCDQYINNSKVLREAMCFLMDPQLGKKLAYVQFPRRFDGIDCNDRYANHNTVLFDINMKGLDGIQGPVYVGTGCVFNRQALYGYKPLSEKRSKMSSSSWPSCCCCSGDSRSIFDLEEMGEELEGFDEQEEPSFTSKKNFEKRFGQSPVFIASTLMEDGGLPKGINSRLMMKEAIHVISCGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPERAAFKGSAPINLSDRLHQVLKWALGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNAIVYPFTSIPLLVYCTIPAVCLLTGKFIMPTLTTLASIWLMALFICIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVGGLDTTNFTVREKTADGTLLGKLYLFKWTTLLIPPTSLVILNMVGIVAGISDAINNGYDSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLALIFSMIWVRFDVFLPKKTGPILKQCGVDC* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1359 822 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 18 822 - -
Lan11g1359 822 Coils Coil 214 234 - -
Lan11g1359 822 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 411 IPR029044 -
Lan11g1359 822 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 18 822 - -
Lan11g1359 822 Pfam Cellulose synthase 116 814 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan11g1359 822 SUPERFAMILY Nucleotide-diphospho-sugar transferases 131 636 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1359 Lan-Chr11 20766697 20771434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1359 19 822 Cell Wall Biosynthesis AT5G17420 69.816 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1359 K10999 - gmx:100777278 1411.74