LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan11g1338	ATGGGCAAAGAACAAATTGAGGTGCTGAATGCACTAGATGTGGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACAAAGCTACTTGGCCGCATATATTACCACCATGAGGGTGCAGAAAAGCCTGGCTCATTGCCTCCCAATGTGGCTGCAGCTGTAAACGGTGTAGCCTTGGTTGGAACGCTTTCGGGGCAACTCTTCTTTGGCTGGCTAGGTGATAAAATGGGCCGAAAAAAGGTCTATGGCATGACACTGATGCTGATGGTTTTGTGCTCAATTGCTTCTGGACTATCTTTCGGACGCGATCCAAAAACTGTCATGACAACTCTTTGCTTTTTCCGATTTTGGCTTGGTTTTGGCATTGGTGGAGACTACCCACTTTCTGCTACAATCATGTCCGAGTATGCAAATAAGAAGACTCGTGGCGCCTTTATAGCTGCAGTCTTTGCTATGCAAGGTTTTGGAATTTTGGCAGGTGGTATATTTGCAATCGTAATCTCGTCTACATTCAAGTCCAATTTTAGTGCTCCAGCATACGAGGTTGATCCATTGGGCTCAACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTGATGTTTGGAGCAATTCCAGCTGCAATGACATTCTACTCGCGGTCGAAAATGCCAGAAACTGCACGTTATACTGCGCTGGTTGCTAAGAATACAGAGCAGGCTGCAAAAGATATGGCTAAGGTTATGCAGATGGAGATTGGAGCAGAACCAAAGAGAGAAGAAGAGCAGACACAATCTAAGCAATTTGGCTTGTTCTCCAAGGAATTCTTCGCTCGCCACGGACTACATTTACTTGGAACTTGCAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAAAAGGATATCTTCACTGCAATCGGTTGGATTCCTCCTGCAAAAACCATGAATGCACTTGAGGAGGTCTACAGAATCGCGAGGGCGCAAACGCTTATCGCTCTTTGTAGTACAGTTCCCGGATACTGGTTTACAGTGGCTTTCATTGACAGAATAGGAAGATTTGCTATCCAATTGATGGGATTCTTCTTCATGACTGTGTTTATGTTTGCTCTTGCCATTCCTTATGACCATTGGACTCATAAGGAAAACAGAATCGGATTCGTGGTGATGTATTCCTTGACATTTTTCTTCGCAAACTTTGGGCCTAATGCTACCACTTTTGTTGTGCCAGCAGAAATTTTCCCTGCCCGATTTCGATCTACTTGCCACGGGATATCATCGGCATCAGGGAAGCTTGGAGCAATGATTGGTGCATTTGGGTTCTTATATTTGGCACAGAACCAGGACAAGACCAAAGCTGAAGCTGGGTACCCTGCTGGTATTGGAGTGAGGAATTCACTGCTTTTGTTGGGTGTGGTTAATATTTTAGGATTTCTATTCACATTCTTGGTGCCTGAGTCAAATGGTAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGAAACCAAGGCATGA	1572	0.4415	MGKEQIEVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHHEGAEKPGSLPPNVAAAVNGVALVGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVLCSIASGLSFGRDPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAIVISSTFKSNFSAPAYEVDPLGSTVPQADYVWRIILMFGAIPAAMTFYSRSKMPETARYTALVAKNTEQAAKDMAKVMQMEIGAEPKREEEQTQSKQFGLFSKEFFARHGLHLLGTCSTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMIGAFGFLYLAQNQDKTKAEAGYPAGIGVRNSLLLLGVVNILGFLFTFLVPESNGKSLEEMSGENEEEETKA*	524

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan11g1338	523	SUPERFAMILY	MFS general substrate transporter	11	513	IPR036259	-
Lan11g1338	523	Pfam	Sugar (and other) transporter	26	513	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
Lan11g1338	523	Gene3D	MFS general substrate transporter like domains	20	523	IPR036259	-
Lan11g1338	523	CDD	MFS_PhT	25	504	-	-
Lan11g1338	523	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	24	506	IPR020846	GO:0022857
Lan11g1338	523	TIGRFAM	2A0109: phosphate:H+ symporter	11	515	IPR004738	GO:0005315\|GO:0006817\|GO:0016021
Lan11g1338	523	PANTHER	INORGANIC PHOSPHATE TRANSPORTER 1-4	1	522	-	-
Lan11g1338	523	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	1	522	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan11g1338	Lan-Chr11	20110164	20112712	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan11g1338	1	520	Inorganic Solute Cotransporters	AT3G54700	83.846	0.0	922

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan11g1338	K08176		-	gmx:100786638	923.309

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan11g1338	11	20110164	20112712	Lan9g0493	9	7290815	7294044	PCT
	Lan11g1338	11	20110164	20112712	Lan5g1246	5	26231883	26234480	PCT

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