Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1338 ATGGGCAAAGAACAAATTGAGGTGCTGAATGCACTAGATGTGGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACAAAGCTACTTGGCCGCATATATTACCACCATGAGGGTGCAGAAAAGCCTGGCTCATTGCCTCCCAATGTGGCTGCAGCTGTAAACGGTGTAGCCTTGGTTGGAACGCTTTCGGGGCAACTCTTCTTTGGCTGGCTAGGTGATAAAATGGGCCGAAAAAAGGTCTATGGCATGACACTGATGCTGATGGTTTTGTGCTCAATTGCTTCTGGACTATCTTTCGGACGCGATCCAAAAACTGTCATGACAACTCTTTGCTTTTTCCGATTTTGGCTTGGTTTTGGCATTGGTGGAGACTACCCACTTTCTGCTACAATCATGTCCGAGTATGCAAATAAGAAGACTCGTGGCGCCTTTATAGCTGCAGTCTTTGCTATGCAAGGTTTTGGAATTTTGGCAGGTGGTATATTTGCAATCGTAATCTCGTCTACATTCAAGTCCAATTTTAGTGCTCCAGCATACGAGGTTGATCCATTGGGCTCAACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTGATGTTTGGAGCAATTCCAGCTGCAATGACATTCTACTCGCGGTCGAAAATGCCAGAAACTGCACGTTATACTGCGCTGGTTGCTAAGAATACAGAGCAGGCTGCAAAAGATATGGCTAAGGTTATGCAGATGGAGATTGGAGCAGAACCAAAGAGAGAAGAAGAGCAGACACAATCTAAGCAATTTGGCTTGTTCTCCAAGGAATTCTTCGCTCGCCACGGACTACATTTACTTGGAACTTGCAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAAAAGGATATCTTCACTGCAATCGGTTGGATTCCTCCTGCAAAAACCATGAATGCACTTGAGGAGGTCTACAGAATCGCGAGGGCGCAAACGCTTATCGCTCTTTGTAGTACAGTTCCCGGATACTGGTTTACAGTGGCTTTCATTGACAGAATAGGAAGATTTGCTATCCAATTGATGGGATTCTTCTTCATGACTGTGTTTATGTTTGCTCTTGCCATTCCTTATGACCATTGGACTCATAAGGAAAACAGAATCGGATTCGTGGTGATGTATTCCTTGACATTTTTCTTCGCAAACTTTGGGCCTAATGCTACCACTTTTGTTGTGCCAGCAGAAATTTTCCCTGCCCGATTTCGATCTACTTGCCACGGGATATCATCGGCATCAGGGAAGCTTGGAGCAATGATTGGTGCATTTGGGTTCTTATATTTGGCACAGAACCAGGACAAGACCAAAGCTGAAGCTGGGTACCCTGCTGGTATTGGAGTGAGGAATTCACTGCTTTTGTTGGGTGTGGTTAATATTTTAGGATTTCTATTCACATTCTTGGTGCCTGAGTCAAATGGTAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGAAACCAAGGCATGA 1572 0.4415 MGKEQIEVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHHEGAEKPGSLPPNVAAAVNGVALVGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVLCSIASGLSFGRDPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAIVISSTFKSNFSAPAYEVDPLGSTVPQADYVWRIILMFGAIPAAMTFYSRSKMPETARYTALVAKNTEQAAKDMAKVMQMEIGAEPKREEEQTQSKQFGLFSKEFFARHGLHLLGTCSTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMIGAFGFLYLAQNQDKTKAEAGYPAGIGVRNSLLLLGVVNILGFLFTFLVPESNGKSLEEMSGENEEEETKA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1338 523 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Lan11g1338 523 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan11g1338 523 Gene3D MFS general substrate transporter like domains 20 523 IPR036259 -
Lan11g1338 523 CDD MFS_PhT 25 504 - -
Lan11g1338 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857
Lan11g1338 523 TIGRFAM 2A0109: phosphate:H+ symporter 11 515 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lan11g1338 523 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4 1 522 - -
Lan11g1338 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1338 Lan-Chr11 20110164 20112712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1338 1 520 Inorganic Solute Cotransporters AT3G54700 83.846 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1338 K08176 - gmx:100786638 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1338 11 20110164 20112712 Lan9g0493 9 7290815 7294044 PCT
Lan11g1338 11 20110164 20112712 Lan5g1246 5 26231883 26234480 PCT