Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1337 ATGGATTTTGATTCTTCTTTCTCCCAACACCAAACCCTTTTCTCTTCCAAACCTTTCTCATGGGAGAATTTCTTTTTCTTCAATGAAGAAAACAACACCACCCTTCCCTTTAACTTCAAGGAATCATCTTCATATTCCAACTCTTCACTCTCTCTTAGCAGCACTGAATCACAAGAAGTCTCTTCCAATTCACAAGTACTCAAAGATACACAACCTCCATCATCATATTCATCAACACCACCAAAGGATCAAAGTAGCAACAAACACAAGAGACCCTTCAGAGGTGTAAGGTCAAGGCCATGGGGTAAATTTGCAGCAGAAATAAGAGACTCAACAAGAAATGGAGTTAGAGTATGGATTGGAACATTTGACACAGCTGAAGCAGCTGCACTAGCTTATGACCAAGCTGCTTTATCAACAAGAGGTGCCATGGCAGTGCTCAACTTTCCTGAACAAGTTGTTAGGGCATCACTCAAAGACATGACCTATAACAATAATAATAACAATAACCCTAATTTGGAAGATGATTGTTCTCCTGTATTGGCACTTAAGAGGAAGCACACAATGAGAAGAAAGTGTAAGAGTAGTGGAGATAGTAATAACAAAAGGACCAAAAGGGGTGATAGAGGGTTAGAGATGGTTTCCAAAAATGTGCTGGTGTTGGAGGATTTAGGATCTGATTATCTAGAGCAACTTCTGAGCTTCACTTCTTCTCAAGTTATTTGGTAG 729 0.3964 MDFDSSFSQHQTLFSSKPFSWENFFFFNEENNTTLPFNFKESSSYSNSSLSLSSTESQEVSSNSQVLKDTQPPSSYSSTPPKDQSSNKHKRPFRGVRSRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGAMAVLNFPEQVVRASLKDMTYNNNNNNNPNLEDDCSPVLALKRKHTMRRKCKSSGDSNNKRTKRGDRGLEMVSKNVLVLEDLGSDYLEQLLSFTSSQVIW* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1337 242 ProSiteProfiles AP2/ERF domain profile. 92 150 IPR001471 GO:0003700|GO:0006355
Lan11g1337 242 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 236 - -
Lan11g1337 242 MobiDBLite consensus disorder prediction 193 209 - -
Lan11g1337 242 Gene3D AP2/ERF domain 92 152 IPR036955 GO:0003700|GO:0006355
Lan11g1337 242 SUPERFAMILY DNA-binding domain 93 151 IPR016177 GO:0003677
Lan11g1337 242 PANTHER DNA-BINDING DOMAIN 2 236 IPR044808 GO:0003700|GO:0009873
Lan11g1337 242 SMART rav1_2 92 156 IPR001471 GO:0003700|GO:0006355
Lan11g1337 242 MobiDBLite consensus disorder prediction 59 83 - -
Lan11g1337 242 Pfam AP2 domain 93 142 IPR001471 GO:0003700|GO:0006355
Lan11g1337 242 MobiDBLite consensus disorder prediction 59 96 - -
Lan11g1337 242 MobiDBLite consensus disorder prediction 188 209 - -
Lan11g1337 242 CDD AP2 93 152 IPR001471 GO:0003700|GO:0006355
Lan11g1337 242 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Lan11g1337 242 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1337 Lan-Chr11 20107406 20108299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1337 35 242 AP2-EREBP Transcription Factor Family AT3G23240 47.393 4.11e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan11g1337 AP2 4.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1337 K14516 - gmx:100784784 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1337 11 20107406 20108299 Lan9g0494 9 7304630 7305738 PCT