Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1334 ATGAGTTCCTCTAATGATCCTTCTTCCACTCCATTGTTGAGATCCAAAAAGAACAGTAGTCATAATCTCCAAAGCTCAAAACCCCAATTTTTTTCTGATCATATTTCACTGACCTCCACGACGCCAGAGAAGCCCGCGCCCCGGTTACATAACCGTGGCGTGGCGCTCTCTGTCGTGGAGATCAGGAAGGTCGCCAAAGGGCTTCAGGATCAAAGTCTCACACAGAAACACAGTGATTTGGATTGGGTGAAGGGCAAATCTGTCAAAAGAAAGATTTTAACGCCTTCACCCCTTAAATCCAAGACCACCGTTGATGGACCCTTTACCATTCCGGAAAAGTATGAAATTTTGTGTGAGTTCTTCCACAGCTTGGATTCATCGATTCGCCTGACGCAAATGAAAGGCAGAATGCCGAGTTTCACGAATATTGCACAGAAGATTGAATCTTTAAGTGATAGGAGGTTTACACATAGTCATTTGGCCCAGTTGCAATTTATCTTACCTGAAGGAATTCTGATTAAGAAGGTACTCGTGTTTGACGAAAGGACAAGTAGTATGAAGCCGGACCTACATGTTACTATAAATCGCAATGAAATATTGTCTGCTGCGACGATGCTTCCTAAATGTGAGAGTTTGTGTGAGAGTATGCAAATGAGGCTGTTATTTCGCATACAGCTAGCAGAATTTTTTAAATCTCATCCCGAGGGTTCTGAAATTCCAGAAGCTGAATTGCCCGAGCCATTCAATCGTCCAAAGCAAGATTGTTTTTCAGACGTATTGAAAACTCCCTCCTCAATTCACCCTCCAAAAATATTGTCATCGAGGATGCTGGATAATGACGTTGTAGATTATACAGAGTCTGCTAACAGAGAAGAAAGATTGTCAGTACCTATCAATTCACCAATTGAAGCACTTAACCAGAAACCGGCAGTAGCCTCTCACATGCCTCAATCTTTCAGAAGGAGTTTTTTGCAAAAATCTATGGAAAATGGAGCAGATAGTATTCAGAAAATTTTGCCATCAGATTCATTCCAAACCCTGGCTCATCCTGTTTCTGAGTCAAACCTGAATAAAAATTCCACATCCCTGGTTAAGTTTGTTTCGGAAGCAGCTGATAGTGAAATATGTCCAACAATCTATGCTTCTTCAGGTTACTTTGAATCATCTAGTGCTCCATGTGCTGCTACTCCAAGCAAAATCATCGATTATACATCAACTCCAGTTAAACATGTTTTCACTCCATCCAGGCTGATGGTAGCTACTCCTGAAATTCCTCCATCCAAAAAACATTACCTTAGCCCGGATGACAACTCTTCCAGTTCAATGAGCAAATTAGTTAGGCGTCCACCTCGTTCAAGGTTATTGAAATTTGACTCTCCAATGGAAAATAAGGAGACACGGGATGAAGATGATGCTGGTCGCTTATCAATCAATGATGATATTTTTGATATCCTCCCAAAGAATCTTCTCGAGTCGATTCGAGAAAAGGAAAGAGTGACAATGGAGGAGAGAGATCCAGTCATCTCACAAGCAAAGAGACGGCAAAAAATGGTTGACAGCCTCCCTAAGCTCTTTAACATGATTCACCTCTTGTTTCATTCAATGAAATGTTCTCTCATTGCAAAAGAGGAGCTTGTAAGCAAGATAATCTCAAGCCATCGTGATATTGTTGACAGAAGAGAAATTGAAGAACAATTGGACTTATTATTAGTACTAGTACCAGAATGGATTTCTGAGAAGTTGACCTCTGGTGGGAACATCCTCTTTAGCATTAATAAAAAATTGAACCCTGGGACCATAAGAGCATCACTTGAAGAAGCAAAGTGA 1827 0.41 MSSSNDPSSTPLLRSKKNSSHNLQSSKPQFFSDHISLTSTTPEKPAPRLHNRGVALSVVEIRKVAKGLQDQSLTQKHSDLDWVKGKSVKRKILTPSPLKSKTTVDGPFTIPEKYEILCEFFHSLDSSIRLTQMKGRMPSFTNIAQKIESLSDRRFTHSHLAQLQFILPEGILIKKVLVFDERTSSMKPDLHVTINRNEILSAATMLPKCESLCESMQMRLLFRIQLAEFFKSHPEGSEIPEAELPEPFNRPKQDCFSDVLKTPSSIHPPKILSSRMLDNDVVDYTESANREERLSVPINSPIEALNQKPAVASHMPQSFRRSFLQKSMENGADSIQKILPSDSFQTLAHPVSESNLNKNSTSLVKFVSEAADSEICPTIYASSGYFESSSAPCAATPSKIIDYTSTPVKHVFTPSRLMVATPEIPPSKKHYLSPDDNSSSSMSKLVRRPPRSRLLKFDSPMENKETRDEDDAGRLSINDDIFDILPKNLLESIREKERVTMEERDPVISQAKRRQKMVDSLPKLFNMIHLLFHSMKCSLIAKEELVSKIISSHRDIVDRREIEEQLDLLLVLVPEWISEKLTSGGNILFSINKKLNPGTIRASLEEAK* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1334 608 CDD Cdt1_m 94 252 IPR014939 -
Lan11g1334 608 CDD Cdt1_c 484 605 IPR032054 -
Lan11g1334 608 Pfam DNA replication factor Cdt1 C-terminal domain 488 580 IPR032054 -
Lan11g1334 608 MobiDBLite consensus disorder prediction 453 472 - -
Lan11g1334 608 PANTHER DNA REPLICATION FACTOR CDT1 8 608 IPR045173 GO:0003677|GO:0030174|GO:0071163
Lan11g1334 608 SUPERFAMILY "Winged helix" DNA-binding domain 106 248 IPR036390 -
Lan11g1334 608 MobiDBLite consensus disorder prediction 1 27 - -
Lan11g1334 608 MobiDBLite consensus disorder prediction 424 448 - -
Lan11g1334 608 Gene3D - 478 608 IPR038090 -
Lan11g1334 608 Pfam DNA replication factor CDT1 like 111 179 IPR014939 -
Lan11g1334 608 SMART CDT1_2 110 246 IPR014939 -
Lan11g1334 608 MobiDBLite consensus disorder prediction 432 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1334 Lan-Chr11 20041758 20045067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1334 1 606 Core DNA Replication Machinery Family AT2G31270 37.500 6.26e-86 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1334 K10727 - qsu:112033519 488.419