Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1333 ATGGAGATGGGTACTAACTTGCACCAAATGCTTAGAAGCCTCTGTTTGAATACTGAGTGGAAGTATGCAATCTTTTGGAAGCTCAAACATCGTGCTAGGATGATGTTGACATGGGAGGATGCTTACTATGAGAATCCTGTTGATTACGACTCTCCAGAAAATAATTGTTGCCATAAGACCATAGAACCGATTGGTGGTCGGAATTTTTCACGTGACCCTCTAGGGTTAGCTTTGGCAAAGATGTCTTATCAAGTATATTCTTTAGGAGAAGGTGTTGTTGGACAGGTAGCTGTTACTGGAAATTATAGGTGGATCTGTGCAGACAATCAAATTACAGGTTGTGGTCCATCTTCTGAGTTTTCTGATGGGTGGCAATCGCAGTTTTCAGCTGGAATTAGGACTATCATTGTTGTAGCAGTAGTCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATGAAGTTATTGAAGATACGAGGGTTGTAGCTCATATCAGAAGTCTCTTTTTGTCTGCACAAGATTATACCATAGGCTACGTTCCTAGTCAAGTACAAAGTGGCCCAAATAATTCTTCATCTCCGCTGAATGTATCCACCAAAACTTTGTCTTCAGAAGTTATGCCTGCTTACTCTCATGATACGGGGAAATCTATGAAGAGTGAAAGACCGGATATTTTAATGCCCTTTGAATGCCCTGGGAAGAACTCTTCACCTCCTGCTGTTTATCAGAAAATGGTTGTGGATGTGGCCGAGCACGAGGGACTTGAATTTAAAAGCGATGGAAGTTCCATTTTGCTTCAGTCATTATCAAATATGATGAATACGGAGCATCAAAAGCTTGTAGAAATGAAACCTGTAAATGAGAGGAAGTTGGAAGGGAACAATAGCGGCTTCAAAGATACAAGTTTCGAAGCAGAAACACATTTCTCATCATTTTTTCACAATTTGGTTATGGATAACAATAGCTTCAATGATTTAATACGCCCATCAGAAAAAGTCGGAGTTGATTCTGCATCCTTTCCTTCAGAGTTTCTTGATGCGGTTCTTTGTGAAAGTGACCAGTTGCGTTATGTAGATATCAACCAAAAGGGGGTGTTGAATGTGCCCAGACCTTCAGATGCAAACTCCCAAGTTACTGAAAAGCTTCAGACTGAGCCTTGTCACAAGGATACCTCATACGCATTGAATTTCCCTCCTGGCTGTGAGCTACATGAAGCACTTGGACCAGGTTTTCTGAAAGGGAATAAATATTTCGATTGGGCCGCACAGGTAAAACAAGATGTTAAAACTGTTGAGATGCCAGATGAGATTAACTGTAGCCAACTGACTTCTGAATCTCGTCGAGAGCCTCTTTTGGAAGCAATGGTGGCCAATGTTTGCCATAGTAATAATGATATTAATAGTGAGTTATCATTTTCTACATCAACTCAATCTGCAATAGCCTCAGAAAAGAATCCTGAAGCTTCTATTCATACCGTGAACACTATTAATTCAGAGGGCTATTCGATAGATCAGTTCTCTCTTGTCCGAGAGGGAAAACACCGTAGTTTGAGTTCATCTGGGATATGTGATATGGTATCCCCGAAAGTTTTTTCTTCTGCATGTCCTAGTTCACGACGTGAACAGTTTGAGAGGTCTGCTGAGCCAGCTAAGAGCAGCAAGAAGAGAGCTAGGCCTGGGGAAAGTAGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGCGAGAACTCGTGCCAAATGGAGCGAAGTGCAGCATCGATACCTTGCTGGAGTGCACGATAAAGCACATGCTCTTTCTCCATAGTGTAACTACTTATGCTGACAAGCTAAGTAAATTTGGCAACTCAAAGCCAAAGTTGCATCACATGGAAACAGATATTCATGGATCATCTAGTTATCAACAGGGTTCAAGTTGGGCAATGGAAGTGGGAGGCCATCTGAAAATACGTTCAATATTAGTCGAGAATCTTAGCAAGAATGGTCAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAGATAGTTGAAGCCATAAGAAGCTTGGGCCTTACAATTTTGAAGGGTGCAACAGAAGCTCATGGTGAGAAGACATGCATAAGTTTTGTGGTTGAGGGCCAAAACAATAGAAATTTACACAGGTTGGATATCTTATGGCCACTTGTTCAATTACTTCAATCCAAGAGCACAATGCACTCATAA 2226 0.4164 MEMGTNLHQMLRSLCLNTEWKYAIFWKLKHRARMMLTWEDAYYENPVDYDSPENNCCHKTIEPIGGRNFSRDPLGLALAKMSYQVYSLGEGVVGQVAVTGNYRWICADNQITGCGPSSEFSDGWQSQFSAGIRTIIVVAVVPLGVVQLGSLNEVIEDTRVVAHIRSLFLSAQDYTIGYVPSQVQSGPNNSSSPLNVSTKTLSSEVMPAYSHDTGKSMKSERPDILMPFECPGKNSSPPAVYQKMVVDVAEHEGLEFKSDGSSILLQSLSNMMNTEHQKLVEMKPVNERKLEGNNSGFKDTSFEAETHFSSFFHNLVMDNNSFNDLIRPSEKVGVDSASFPSEFLDAVLCESDQLRYVDINQKGVLNVPRPSDANSQVTEKLQTEPCHKDTSYALNFPPGCELHEALGPGFLKGNKYFDWAAQVKQDVKTVEMPDEINCSQLTSESRREPLLEAMVANVCHSNNDINSELSFSTSTQSAIASEKNPEASIHTVNTINSEGYSIDQFSLVREGKHRSLSSSGICDMVSPKVFSSACPSSRREQFERSAEPAKSSKKRARPGESSRPRPRDRQLIQDRIKELRELVPNGAKCSIDTLLECTIKHMLFLHSVTTYADKLSKFGNSKPKLHHMETDIHGSSSYQQGSSWAMEVGGHLKIRSILVENLSKNGQMLVEMLCEECSHFLEIVEAIRSLGLTILKGATEAHGEKTCISFVVEGQNNRNLHRLDILWPLVQLLQSKSTMHS* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1333 741 MobiDBLite consensus disorder prediction 536 569 - -
Lan11g1333 741 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 168 IPR025610 -
Lan11g1333 741 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 556 605 IPR011598 GO:0046983
Lan11g1333 741 MobiDBLite consensus disorder prediction 540 569 - -
Lan11g1333 741 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 3 740 - -
Lan11g1333 741 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 3 740 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1333 Lan-Chr11 20015292 20021537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1333 3 737 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.026 2.88e-150 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1333 - - gmx:100777740 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1333 11 20015292 20021537 Lan4g1279 4 21508663 21513601 LSH