Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1324 ATGTATTCTCATAGGGATCCTAGTAGTGTTAGCAAGAGTGGTACTGCGAATATTTTTATGAAGACTTTGGACAAGGTAAATGATCATAGAGGCTTACATGATACATTTTCTGCCTTTGGACAAATTCTTTCATGCAAAATAGCGATCGATGCTTCTGGCCAATCTAAAGACTATGGTTTTGTTCAGTTCAACAGTGAAGAGGCTGCTCAAAATGATATGTGGAGGTTGACAACATTGGACTGTAGCATTCGTCCATGCCTTTGCATGTCCATCTCCCTAACTCTACTCAGCTCCATTCCACGATTAGGAAATGCTCTTTTCAGCAATAGAGATGTGGGAGCTGCAAAAACCATCGTGAAAAACAACAGGGAGAAAAACAGCCAGCATCGATGGAGACATGAGGAGAGGATTCACATGTGA 420 0.4143 MYSHRDPSSVSKSGTANIFMKTLDKVNDHRGLHDTFSAFGQILSCKIAIDASGQSKDYGFVQFNSEEAAQNDMWRLTTLDCSIRPCLCMSISLTLLSSIPRLGNALFSNRDVGAAKTIVKNNREKNSQHRWRHEERIHM* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1324 139 Gene3D - 5 69 IPR012677 -
Lan11g1324 139 PANTHER POLYADENYLATE-BINDING PROTEIN 1 79 - -
Lan11g1324 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 70 IPR000504 GO:0003723
Lan11g1324 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 80 IPR000504 GO:0003723
Lan11g1324 139 SMART rrm1_1 17 89 IPR000504 GO:0003723
Lan11g1324 139 SUPERFAMILY RNA-binding domain, RBD 9 71 IPR035979 GO:0003676
Lan11g1324 139 PANTHER RNA BINDING PROTEIN 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1324 Lan-Chr11 19786185 19787055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1324 1 79 Eukaryotic Initiation Factors Gene Family AT4G34110 60.759 5.05e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1324 K13126 - lang:109359814 286.189