Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1310 ATGTTGGAAATGGAGAGGGATTTTGATTCCAAGTTGAAGATTCAGGGTGATTCTTCTTCCAATGGTGGTGGTGGTGGGATTGTTCAAAAATTGAAGAGCTTTGCTTTTAGGGCTCCTCAGGAGAATTACTCTATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACGAGAACTGTGTATGCGCTGAAGATCATGGACAAAAAGTTCATTACCAAAGAGAATAAAACCGCTTATGTGAAGTTGGAACGCATTGTGCTTGATCAATTGGATCATCCTGGCATCGTGCAGCTATATTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCTTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTAACAGAGGCTGAGGCACGATTCTATGCAGCTGAAGTTGTGGATGCTGTCGAATACATACATCATTTGGGATTGATACATCGTGATATAAAGCCAGAGAACTTATTGCTTACAATGGAAGGACATATTAAAGTAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCATCAGATGATAAAGCCTGCACTTTTGTGGGAACAGCTGCTTACGTCCCTCCGGAGGTTCTTAATTCCTCTCCAGCCACTTTTGGAAATGACCTCTGGGCACTTGGATGCACATTGTATCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGATATTCGATTTCCAGATTACTTTTCTGATGAAGCAAGAGACCTTATTGACAGACTATTGGATCCGGACCCCAGCAGAAGACTAGGTGCAGGAGCTGGTGGTTATGATGCCTTGAAAAGACATCCATATTTCAAGGGGGTTGACTGGAACAACTTAAGGGCACAAACTCCCCCGAAACTTGCTCTGGAACCTGGGACTCCGTCACCTGAGCGTGATGATGCTCACGAGTCATCGTGGAATCCCTCTCACATAGGGGAGAGTTCTGAGGAGACGGGGCACATATCCAGGCTAGCTTCAATCGACTCATTTGATTCAAAATGGCAACAATTTTTGGATCCTGGGGAATCTATTCTTATGATCTCTACAATGAAGAAATTGCGGAAACTAACAAGCAAGAAGGTGCAACTCATCCTTACCAACAAACCGAAGTTAATCTACGTGGATCCATCAAAGCTAACTGGGAAGGGAGATATAATATGGTCTGACAATCCAAATGATTTAAACATCCAAGTGACTAGTCCATCACATTTCAAGATTAGCACACCTAAAAAGGTAATGTCATTTGAGGATGCAAAGCAAAGAGCATGGCAGTGGAAAAATGCAATTGAAGGACTTCAAAACCGGTGA 1440 0.425 MLEMERDFDSKLKIQGDSSSNGGGGGIVQKLKSFAFRAPQENYSIQDFELGKIYGVGSYSKVVRAKKKDTRTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVQLYFTFQDTFSLYMALESCEGGELFDQITRKGRLTEAEARFYAAEVVDAVEYIHHLGLIHRDIKPENLLLTMEGHIKVADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSDEARDLIDRLLDPDPSRRLGAGAGGYDALKRHPYFKGVDWNNLRAQTPPKLALEPGTPSPERDDAHESSWNPSHIGESSEETGHISRLASIDSFDSKWQQFLDPGESILMISTMKKLRKLTSKKVQLILTNKPKLIYVDPSKLTGKGDIIWSDNPNDLNIQVTSPSHFKISTPKKVMSFEDAKQRAWQWKNAIEGLQNR* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1310 479 SUPERFAMILY PH domain-like 309 478 - -
Lan11g1310 479 Gene3D Transferase(Phosphotransferase) domain 1 132 328 - -
Lan11g1310 479 MobiDBLite consensus disorder prediction 1 25 - -
Lan11g1310 479 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 475 - -
Lan11g1310 479 CDD STKc_PDK1 46 315 IPR039046 GO:0004674
Lan11g1310 479 SMART serkin_6 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1310 479 Gene3D - 343 479 IPR011993 -
Lan11g1310 479 Gene3D Phosphorylase Kinase; domain 1 46 131 - -
Lan11g1310 479 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 23 475 - -
Lan11g1310 479 MobiDBLite consensus disorder prediction 326 362 - -
Lan11g1310 479 Pfam PH domain 376 478 IPR033931 -
Lan11g1310 479 Coils Coil 459 479 - -
Lan11g1310 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lan11g1310 479 SUPERFAMILY Protein kinase-like (PK-like) 45 343 IPR011009 -
Lan11g1310 479 Pfam Protein kinase domain 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1310 479 ProSiteProfiles Protein kinase domain profile. 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1310 Lan-Chr11 19386324 19394856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1310 1 479 AGC Kinase Gene Family AT3G10540 79.878 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Lan11g1310 Pkinase 4.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1310 K06276 - gmx:100788780 827.78